Coexpression cluster: Cluster_12 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0071949 FAD binding 1.68% (4/238) 3.97 5.6e-05 0.007948
GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity 1.26% (3/238) 4.77 4.8e-05 0.010297
GO:0004312 fatty acid synthase activity 1.26% (3/238) 4.77 4.8e-05 0.010297
GO:0098776 protein transport across the cell outer membrane 1.68% (4/238) 3.6 0.00019 0.013498
GO:0015628 protein secretion by the type II secretion system 1.68% (4/238) 3.6 0.00019 0.013498
GO:0015627 type II protein secretion system complex 1.68% (4/238) 3.6 0.00019 0.013498
GO:0016053 organic acid biosynthetic process 2.94% (7/238) 2.09 0.001103 0.026175
GO:0009086 methionine biosynthetic process 0.84% (2/238) 4.77 0.00133 0.02705
GO:0000097 sulfur amino acid biosynthetic process 0.84% (2/238) 4.77 0.00133 0.02705
GO:0140352 export from cell 2.52% (6/238) 2.31 0.001081 0.027141
GO:0032940 secretion by cell 2.52% (6/238) 2.31 0.001081 0.027141
GO:0009306 protein secretion 2.52% (6/238) 2.31 0.001081 0.027141
GO:0035592 establishment of protein localization to extracellular region 2.52% (6/238) 2.31 0.001081 0.027141
GO:0071692 protein localization to extracellular region 2.52% (6/238) 2.31 0.001081 0.027141
GO:0046903 secretion 2.52% (6/238) 2.27 0.001273 0.028601
GO:0071806 protein transmembrane transport 1.68% (4/238) 3.07 0.000959 0.034107
GO:0017000 antibiotic biosynthetic process 1.26% (3/238) 3.77 0.000888 0.034487
GO:0006633 fatty acid biosynthetic process 1.26% (3/238) 3.77 0.000888 0.034487
GO:0017144 drug metabolic process 1.26% (3/238) 3.77 0.000888 0.034487
GO:0000096 sulfur amino acid metabolic process 1.26% (3/238) 3.77 0.000888 0.034487
GO:0016999 antibiotic metabolic process 1.26% (3/238) 3.77 0.000888 0.034487
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Clostridioides difficile HCCA Cluster_11 0.03 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_12 0.029 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_37 0.03 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_38 0.033 OrthoFinder Compare
Escherichia coli HCCA Cluster_2 0.033 OrthoFinder Compare
Escherichia coli HCCA Cluster_3 0.046 OrthoFinder Compare
Escherichia coli HCCA Cluster_15 0.045 OrthoFinder Compare
Escherichia coli HCCA Cluster_28 0.032 OrthoFinder Compare
Escherichia coli HCCA Cluster_34 0.03 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_10 0.031 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_2 0.032 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_5 0.028 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_11 0.035 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_19 0.027 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_42 0.046 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_46 0.028 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_47 0.027 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_51 0.03 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_15 0.027 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_7 0.027 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_5 0.039 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_6 0.035 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_11 0.036 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_18 0.036 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_21 0.028 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_28 0.056 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_30 0.028 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_50 0.029 OrthoFinder Compare
Salmonella enterica HCCA Cluster_5 0.028 OrthoFinder Compare
Salmonella enterica HCCA Cluster_9 0.031 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_4 0.062 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_18 0.035 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_22 0.045 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_29 0.028 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_33 0.033 OrthoFinder Compare
Sequences (238) (download table)

InterPro Domains

GO Terms

Family Terms