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CRO83709 (rpsU)


Aliases : rpsU

Description : 30S ribosomal protein S21 [Ensembl]. Ribosomal protein S21 [Interproscan].


Gene families : OG_02_0000673 (OrthoFinder) Phylogenetic Tree(s): OG0000673_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRO83709
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AAC76101 rpsU, b3065 30S ribosomal subunit protein S21 [Ensembl]. Ribosomal... 0.09 OrthoFinder
AAL22083 STM3209, rpsU 30S ribosomal subunit protein S21 [Ensembl]. Ribosomal... 0.09 OrthoFinder
AEA94535 rpsU, OG1RF_11848 30S ribosomal protein S21 [Ensembl]. Ribosomal protein... 0.07 OrthoFinder
AGT22497 N559_0702 ribosomal protein S21 [Ensembl]. 0.08 OrthoFinder
AKP15278 rpsU, WX61_01229 30S ribosomal protein S21 [Ensembl]. Ribosomal protein... 0.05 OrthoFinder
CPC82226 rpsU, ERS093114_01405 30S ribosomal protein S21 [Ensembl]. Ribosomal protein... 0.05 OrthoFinder
EDJ91463 CGSHi22421_06827 DNA primase [Ensembl]. Ribosomal protein S21 [Interproscan]. 0.06 OrthoFinder
KNA49206 VCV51_033802 ribosomal protein S21 [Ensembl]. Ribosomal protein S21... 0.12 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
MF GO:0004810 tRNA adenylyltransferase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006826 iron ion transport IEP Enrichment
BP GO:0015886 heme transport IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
BP GO:0017004 cytochrome complex assembly IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901678 iron coordination entity transport IEP Enrichment
MF GO:1990817 RNA adenylyltransferase activity IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR001911 Ribosomal_S21 4 56
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_03589