CRO86371 (oxyR_2)

Aliases : oxyR_2

Description : Morphology and auto-aggregation control protein [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].

Gene families : OG_02_0000002 (OrthoFinder) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CRO86371

Target	Alias	Description	ECC score	Gene Family Method
AAC76943	oxyR, b3961	oxidative and nitrosative stress transcriptional...	0.03	OrthoFinder
AAK99632	spr0828, cpsY	Regulatory function on capsule expression in group B...	0.01	OrthoFinder
AAL19636	STM0692	putative LysR family transcriptional regulator...	0.02	OrthoFinder
AEA93759	OG1RF_11072	transcriptional regulator [Ensembl]. LysR substrate...	0.01	OrthoFinder
AEA93760	OG1RF_11073	LysR family transcriptional regulator [Ensembl]. LysR...	0.01	OrthoFinder
AEA94108	OG1RF_11421	LysR family transcriptional regulator [Ensembl]. LysR...	0.02	OrthoFinder
AEA94210	OG1RF_11523	LysR family transcriptional regulator [Ensembl]....	0.03	OrthoFinder
AEA94928	OG1RF_12241	LysR family transcriptional regulator [Ensembl]. LysR...	0.02	OrthoFinder
AGT23181	N559_1423	LysR family transcriptional regulator [Ensembl]. LysR...	0.02	OrthoFinder
AGT23255	N559_1502	putative LysR-family transcriptional regulator...	0.01	OrthoFinder
AGT23273	N559_1520, CynR	DNA-binding transcriptional regulator CynR [Ensembl]....	0.01	OrthoFinder
AGT23447	N559_1705	LysR family transcriptional regulator [Ensembl]. LysR...	0.01	OrthoFinder
AGT24793	N559_3132	LysR family transcriptional regulator [Ensembl]. LysR...	0.01	OrthoFinder
AGT26618	N559_5041	putative LysR-family transcriptional regulator...	0.02	OrthoFinder
AKI48958	L2625_01040	transcriptional regulator, LysR family [Ensembl]....	0.01	OrthoFinder
CCL17254	BN171_1410016	Transcriptional regulator, LysR family [Ensembl]. LysR...	0.02	OrthoFinder
CCL18208	BN171_2160004	Transcriptional regulator, LysR family [Ensembl]. LysR...	0.01	OrthoFinder
CCL19137	BN171_2880004	Transcriptional regulator, LysR family [Ensembl]. LysR...	0.02	OrthoFinder
CCL19204	BN171_2950006	Transcriptional regulator, LysR family [Ensembl]. LysR...	0.02	OrthoFinder
CCL20714	BN171_960006	LysR family transcriptional regulator [Ensembl]. LysR...	0.01	OrthoFinder
CRO27185	oxyR_1	Morphology and auto-aggregation control protein...	0.03	OrthoFinder
CRP03013	gltC_5	HTH-type transcriptional regulator GltC [Ensembl]. LysR...	0.06	OrthoFinder
KNA54936	VCV51_031768	LysR substrate binding domain-containing protein...	0.04	OrthoFinder
KNA56848	VCV51_032860	LysR substrate binding domain-containing protein...	0.03	OrthoFinder
KNA59752	VCV51_032447	lysR family Bacterial regulatory helix-turn-helix...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Enrichment
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003677	DNA binding	IEP	Enrichment
MF	GO:0005488	binding	IEP	Enrichment
BP	GO:0035556	intracellular signal transduction	IEP	Enrichment
MF	GO:0043565	sequence-specific DNA binding	IEP	Enrichment
MF	GO:0097159	organic cyclic compound binding	IEP	Enrichment
MF	GO:1901363	heterocyclic compound binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR005119	LysR_subst-bd	89	295
IPR000847	Tscrpt_reg_HTH_LysR	5	64

External Links

Locus_tag	PAERUG_E11_London_26_VIM_2_06_13_03680

CRO86371 (oxyR_2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation