Aliases : allS_2
Description : HTH-type transcriptional activator AllS [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].
Gene families : OG_02_0001112 (OrthoFinder) Phylogenetic Tree(s): OG0001112_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: CRO86714 | |
Cluster | HCCA: Cluster_9 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AGT22124 | N559_0305 | putative LysR-family transcriptional regulator... | 0.03 | OrthoFinder | |
AGT23520 | N559_1784 | LysR family transcriptional regulator [Ensembl]. LysR... | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0019842 | vitamin binding | IEP | Enrichment |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | Enrichment |
MF | GO:0050661 | NADP binding | IEP | Enrichment |
MF | GO:0070279 | vitamin B6 binding | IEP | Enrichment |
Locus_tag | PAERUG_E11_London_26_VIM_2_06_13_03692 |