Coexpression cluster: Cluster_9 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0019222 regulation of metabolic process 25.32% (39/154) 2.1 0.0 0.0
GO:0060255 regulation of macromolecule metabolic process 25.32% (39/154) 2.1 0.0 0.0
GO:0031323 regulation of cellular metabolic process 25.32% (39/154) 2.11 0.0 0.0
GO:0051171 regulation of nitrogen compound metabolic process 25.32% (39/154) 2.11 0.0 0.0
GO:0010468 regulation of gene expression 25.32% (39/154) 2.11 0.0 0.0
GO:0080090 regulation of primary metabolic process 25.32% (39/154) 2.1 0.0 0.0
GO:0010556 regulation of macromolecule biosynthetic process 25.32% (39/154) 2.11 0.0 0.0
GO:0009889 regulation of biosynthetic process 25.32% (39/154) 2.11 0.0 0.0
GO:0031326 regulation of cellular biosynthetic process 25.32% (39/154) 2.11 0.0 0.0
GO:0019219 regulation of nucleobase-containing compound metabolic process 25.32% (39/154) 2.12 0.0 0.0
GO:2000112 regulation of cellular macromolecule biosynthetic process 25.32% (39/154) 2.12 0.0 0.0
GO:0051252 regulation of RNA metabolic process 25.32% (39/154) 2.12 0.0 0.0
GO:2001141 regulation of RNA biosynthetic process 25.32% (39/154) 2.12 0.0 0.0
GO:0003700 DNA-binding transcription factor activity 20.13% (31/154) 2.43 0.0 0.0
GO:0140110 transcription regulator activity 20.13% (31/154) 2.42 0.0 0.0
GO:0006355 regulation of transcription, DNA-templated 25.32% (39/154) 2.13 0.0 0.0
GO:1903506 regulation of nucleic acid-templated transcription 25.32% (39/154) 2.13 0.0 0.0
GO:0050794 regulation of cellular process 27.92% (43/154) 1.85 0.0 0.0
GO:0050789 regulation of biological process 27.92% (43/154) 1.83 0.0 0.0
GO:0065007 biological regulation 27.92% (43/154) 1.8 0.0 0.0
GO:0043565 sequence-specific DNA binding 9.09% (14/154) 2.91 0.0 0.0
GO:0008150 biological_process 44.16% (68/154) 0.71 3e-06 2.4e-05
GO:0003677 DNA binding 12.99% (20/154) 1.51 1.9e-05 0.000168
GO:0003674 molecular_function 53.25% (82/154) 0.53 2.4e-05 0.000203
GO:0003676 nucleic acid binding 14.94% (23/154) 1.32 3.8e-05 0.000315
GO:0005975 carbohydrate metabolic process 5.19% (8/154) 2.52 6.5e-05 0.000515
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds 2.6% (4/154) 3.94 8.7e-05 0.000665
GO:0097159 organic cyclic compound binding 23.38% (36/154) 0.87 0.000176 0.00125
GO:1901363 heterocyclic compound binding 23.38% (36/154) 0.87 0.000176 0.00125
GO:0016798 hydrolase activity, acting on glycosyl bonds 2.6% (4/154) 3.4 0.000439 0.003011
GO:0005488 binding 24.68% (38/154) 0.62 0.003473 0.02308
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Campylobacter jejuni HCCA Cluster_1 0.036 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_12 0.049 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_27 0.03 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_13 0.03 OrthoFinder Compare
Escherichia coli HCCA Cluster_3 0.038 OrthoFinder Compare
Escherichia coli HCCA Cluster_8 0.041 OrthoFinder Compare
Escherichia coli HCCA Cluster_9 0.033 OrthoFinder Compare
Escherichia coli HCCA Cluster_25 0.027 OrthoFinder Compare
Escherichia coli HCCA Cluster_33 0.031 OrthoFinder Compare
Escherichia coli HCCA Cluster_45 0.028 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_21 0.049 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_24 0.052 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_31 0.028 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_37 0.031 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_42 0.045 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_46 0.035 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_47 0.029 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_51 0.047 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_16 0.027 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_2 0.036 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_5 0.04 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_6 0.027 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_10 0.029 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_11 0.04 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_14 0.036 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_15 0.037 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_17 0.029 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_27 0.036 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_43 0.031 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_48 0.027 OrthoFinder Compare
Salmonella enterica HCCA Cluster_4 0.041 OrthoFinder Compare
Salmonella enterica HCCA Cluster_7 0.031 OrthoFinder Compare
Salmonella enterica HCCA Cluster_27 0.052 OrthoFinder Compare
Salmonella enterica HCCA Cluster_38 0.035 OrthoFinder Compare
Salmonella enterica HCCA Cluster_41 0.028 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_22 0.032 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_23 0.032 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_29 0.042 OrthoFinder Compare
Sequences (154) (download table)

InterPro Domains

GO Terms

Family Terms