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Aliases : potB_2
Description : Spermidine/putrescine transport system permease protein PotB [Ensembl]. Binding-protein-dependent transport system inner membrane component [Interproscan].
Gene families : OG_02_0000265 (OrthoFinder) Phylogenetic Tree(s): OG0000265_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: CRO93070 | |
| Cluster | HCCA: Cluster_19 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC73943 | potH, b0856 | putrescine ABC transporter permease [Ensembl].... | 0.05 | OrthoFinder | |
| AAL00049 | spr1245, potB | ABC transporter membrane-spanning... | 0.02 | OrthoFinder | |
| AAL19815 | STM0879, potH | putrescine transporter [Ensembl].... | 0.02 | OrthoFinder | |
| AEA94710 | potB, OG1RF_12023 | spermidine/putrescine ABC superfamily ATP binding... | 0.03 | OrthoFinder | |
| AKI48758 | potB, L2625_00829 | spermidine/putrescine ABC transporter, permease protein... | 0.05 | OrthoFinder | |
| CCL17169 | potB, BN171_1330030 | ABC-type transport system,spermidine/putrescine permease... | 0.05 | OrthoFinder | |
| CPC39960 | potB, ERS093114_00324 | Spermidine Putrescine ABC transporter permease component... | 0.04 | OrthoFinder | |
| CRO82794 | potH_1 | Putrescine transport system permease protein PotH... | 0.05 | OrthoFinder | |
| CRO92437 | potH_2 | Putrescine transport system permease protein PotH... | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0016020 | membrane | IEA | Interproscan |
| BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Enrichment |
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Enrichment |
| MF | GO:0004672 | protein kinase activity | IEP | Enrichment |
| MF | GO:0004673 | protein histidine kinase activity | IEP | Enrichment |
| BP | GO:0007165 | signal transduction | IEP | Enrichment |
| MF | GO:0016301 | kinase activity | IEP | Enrichment |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Enrichment |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Enrichment |
| BP | GO:0035556 | intracellular signal transduction | IEP | Enrichment |
| BP | GO:0050789 | regulation of biological process | IEP | Enrichment |
| BP | GO:0050794 | regulation of cellular process | IEP | Enrichment |
| BP | GO:0065007 | biological regulation | IEP | Enrichment |
| MF | GO:0140299 | small molecule sensor activity | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000515 | MetI-like | 108 | 298 |
| Locus_tag | PAERUG_E11_London_26_VIM_2_06_13_03872 |