CRO96044 (yjiR_2)

Aliases : yjiR_2

Description : putative HTH-type transcriptional regulator YjiR [Ensembl]. Bacterial regulatory proteins, Aminotransferase class I and II [Interproscan].

Gene families : OG_02_0000163 (OrthoFinder) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CRO96044

Target Alias Description ECC score Gene Family Method Actions
AAL00054 spr1250 Conserved hypothetical protein [Ensembl]. Bacterial... 0.02 OrthoFinder
AGT22557 N559_0766 putative aminotransferase [Ensembl]. 0.01 OrthoFinder
AGT22995 N559_1231 putative GntR family regulatory protein [Ensembl]. gntR... 0.03 OrthoFinder
AGT24059 N559_2360 transcriptional regulator [Ensembl]. gntR family [InterProScan]. 0.02 OrthoFinder
CCL19817 BN171_3520003 Transcriptional regulator, GntR family [Ensembl].... 0.01 OrthoFinder
CRO34462 gabR_1 HTH-type transcriptional regulatory protein GabR... 0.04 OrthoFinder
CRP05205 gabR_3 HTH-type transcriptional regulatory protein GabR... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
InterPro domains Description Start Stop
IPR004839 Aminotransferase_I/II 105 461
IPR000524 Tscrpt_reg_HTH_GntR 3 66