CRO98670

Description : transcriptional activator FtrA [Ensembl]. Helix-turn-helix domain, Arabinose-binding domain of AraC transcription regulator [Interproscan].

Gene families : OG_02_0000508 (OrthoFinder) Phylogenetic Tree(s): OG0000508_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CRO98670
Cluster	HCCA: Cluster_50

Target	Alias	Description	ECC score	Gene Family Method	Actions
CRO92525	virS_6	Virulence-regulating protein VirS [Ensembl]....	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001897	cytolysis by symbiont of host cells	IEP	Enrichment
BP	GO:0001906	cell killing	IEP	Enrichment
BP	GO:0001907	killing by symbiont of host cells	IEP	Enrichment
MF	GO:0004175	endopeptidase activity	IEP	Enrichment
MF	GO:0004602	glutathione peroxidase activity	IEP	Enrichment
MF	GO:0005509	calcium ion binding	IEP	Enrichment
CC	GO:0005615	extracellular space	IEP	Enrichment
BP	GO:0006979	response to oxidative stress	IEP	Enrichment
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Enrichment
MF	GO:0008233	peptidase activity	IEP	Enrichment
MF	GO:0008830	dTDP-4-dehydrorhamnose 3,5-epimerase activity	IEP	Enrichment
BP	GO:0009314	response to radiation	IEP	Enrichment
BP	GO:0009416	response to light stimulus	IEP	Enrichment
BP	GO:0009581	detection of external stimulus	IEP	Enrichment
BP	GO:0009582	detection of abiotic stimulus	IEP	Enrichment
BP	GO:0009583	detection of light stimulus	IEP	Enrichment
BP	GO:0009584	detection of visible light	IEP	Enrichment
BP	GO:0009628	response to abiotic stimulus	IEP	Enrichment
MF	GO:0015562	efflux transmembrane transporter activity	IEP	Enrichment
MF	GO:0016805	dipeptidase activity	IEP	Enrichment
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	Enrichment
BP	GO:0018298	protein-chromophore linkage	IEP	Enrichment
BP	GO:0019835	cytolysis	IEP	Enrichment
BP	GO:0019836	hemolysis by symbiont of host erythrocytes	IEP	Enrichment
BP	GO:0030258	lipid modification	IEP	Enrichment
BP	GO:0030259	lipid glycosylation	IEP	Enrichment
BP	GO:0031640	killing of cells of other organism	IEP	Enrichment
BP	GO:0042618	poly-hydroxybutyrate metabolic process	IEP	Enrichment
BP	GO:0042619	poly-hydroxybutyrate biosynthetic process	IEP	Enrichment
BP	GO:0044179	hemolysis in other organism	IEP	Enrichment
BP	GO:0044403	biological process involved in symbiotic interaction	IEP	Enrichment
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEP	Enrichment
BP	GO:0051606	detection of stimulus	IEP	Enrichment
BP	GO:0051701	biological process involved in interaction with host	IEP	Enrichment
BP	GO:0051715	cytolysis in other organism	IEP	Enrichment
BP	GO:0051801	cytolysis in other organism involved in symbiotic interaction	IEP	Enrichment
BP	GO:0051883	killing of cells in other organism involved in symbiotic interaction	IEP	Enrichment
BP	GO:0052331	hemolysis in other organism involved in symbiotic interaction	IEP	Enrichment
BP	GO:0070085	glycosylation	IEP	Enrichment
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Enrichment
BP	GO:1901440	poly(hydroxyalkanoate) metabolic process	IEP	Enrichment
BP	GO:1901441	poly(hydroxyalkanoate) biosynthetic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR018060	HTH_AraC	251	328
IPR032687	AraC-type_N	54	198

External Links

Locus_tag	PAERUG_E11_London_26_VIM_2_06_13_04044

CRO98670

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation