CRP07594 (czcR_2)

Aliases : czcR_2

Description : Transcriptional activator protein CzcR [Ensembl]. Response regulator receiver domain, Transcriptional regulatory protein [Interproscan].

Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CRP07594

Target	Alias	Description	ECC score	Gene Family Method
AEA92946	OG1RF_10259	response regulator [Ensembl]. Response regulator...	0.02	OrthoFinder
AEA94101	phoP, OG1RF_11414	response regulator [Ensembl]. Response regulator...	0.01	OrthoFinder
AGT23469	N559_1728, BaeR	DNA-binding transcriptional regulator BaeR [Ensembl]....	0.02	OrthoFinder
AGT26042	N559_4437, CreB	DNA-binding response regulator CreB [Ensembl]. Response...	0.01	OrthoFinder
CCL17156	BN171_1330017	Two-component response regulator [Ensembl]. Response...	0.02	OrthoFinder
CCL17650	BN171_1640040	Two-component response regulator [Ensembl]. Response...	0.01	OrthoFinder
CCL17733	BN171_1740008	Two-component response regulator [Ensembl]. Response...	0.01	OrthoFinder
CCL17829	vanR, BN171_1830003	Two-component response regulator [Ensembl]. Response...	0.02	OrthoFinder
CCL17877	BN171_1920004	Two-component response regulator [Ensembl]. Response...	0.01	OrthoFinder
KNA56836	VCV51_030475, PhoB	phosphate regulon transcriptional regulatory protein...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001789	Sig_transdc_resp-reg_receiver	3	113
IPR001867	OmpR/PhoB-type_DNA-bd	146	220

External Links

Locus_tag	PAERUG_E11_London_26_VIM_2_06_13_04313

CRP07594 (czcR_2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation