CRP18948 (ompR_3)

Aliases : ompR_3

Description : Transcriptional regulatory protein OmpR [Ensembl]. Response regulator receiver domain, Transcriptional regulatory protein [Interproscan].

Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CRP18948
Cluster	HCCA: Cluster_37

Target	Alias	Description	ECC score	Gene Family Method
AAC75035	hprR, b1969	response regulator family protein [Ensembl]....	0.06	OrthoFinder
AAC76061	qseB, b3025	quorum sensing DNA-binding response regulator in...	0.04	OrthoFinder
AAK99332	spr0528, vncR	VncR, response regulator [Ensembl]. Transcriptional...	0.02	OrthoFinder
AAK99511	spr0707, ciaR	Response regulator, transcriptional regulatory protein...	0.03	OrthoFinder
AAK99910	spr1107, rr02	Response regulator [Ensembl]. Transcriptional regulatory...	0.02	OrthoFinder
AAL00800	spr1998, rr06	Response regulator [Ensembl]. Transcriptional regulatory...	0.02	OrthoFinder
AAL22051	STM3177, ygiX	putative transcriptional regulator [Ensembl]. Response...	0.03	OrthoFinder
AEA93716	OG1RF_11029	response regulator [Ensembl]. Response regulator...	0.03	OrthoFinder
AEA94850	vanR, OG1RF_12163	response regulator [Ensembl]. Response regulator...	0.02	OrthoFinder
AGT22533	N559_0740, QseB	DNA-binding transcriptional regulator QseB [Ensembl]....	0.03	OrthoFinder
AGT25698	N559_4072, PhoB	transcriptional regulator PhoB [Ensembl]. Response...	0.04	OrthoFinder
AGT26875	N559_5301, CusR	DNA-binding transcriptional activator CusR [Ensembl]....	0.04	OrthoFinder
AHY40427	CJ8421_06100	two-component regulator [Ensembl]. Transcriptional...	0.03	OrthoFinder
AKI49943	resD, L2625_02095	DNA-binding response regulator [Ensembl]. OmpR/PhoB-type...	0.03	OrthoFinder
CCG27642	No alias	Two-component response regulator SA14-24 [Ensembl]....	0.03	OrthoFinder
CCL17156	BN171_1330017	Two-component response regulator [Ensembl]. Response...	0.03	OrthoFinder
CCL17733	BN171_1740008	Two-component response regulator [Ensembl]. Response...	0.03	OrthoFinder
CCL17829	vanR, BN171_1830003	Two-component response regulator [Ensembl]. Response...	0.03	OrthoFinder
CCL18125	kdpE, BN171_2100009	Two-component response regulator KdpE [Ensembl]....	0.03	OrthoFinder
CCL19099	BN171_2870029	Two-component response regulator [Ensembl]. Response...	0.02	OrthoFinder
CCL19749	BN171_3450003	Two-component response regulator [Ensembl]. Response...	0.03	OrthoFinder
CPC31435	arlR, ERS093114_00002	Putative response regulator ArlR [Ensembl]....	0.03	OrthoFinder
CPC70217	vicR, ERS093114_01104	Two-component response regulator [Ensembl]....	0.04	OrthoFinder
CRO52494	czcR_1	Transcriptional activator protein CzcR [Ensembl]....	0.04	OrthoFinder
CRO55563	arcA_1	Dye resistance protein [Ensembl]. Response regulator...	0.06	OrthoFinder
CRP58313	czcR_4	Transcriptional activator protein CzcR [Ensembl]....	0.04	OrthoFinder
KNA52268	VCV51_033433	response regulator receiver domain-containing protein...	0.03	OrthoFinder
KNA56836	VCV51_030475, PhoB	phosphate regulon transcriptional regulatory protein...	0.03	OrthoFinder
KNA60550	VCV51_032221	response regulator receiver domain-containing protein...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006259	DNA metabolic process	IEP	Enrichment
BP	GO:0006284	base-excision repair	IEP	Enrichment
BP	GO:0006631	fatty acid metabolic process	IEP	Enrichment
BP	GO:0006633	fatty acid biosynthetic process	IEP	Enrichment
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Enrichment
MF	GO:0008770	[acyl-carrier-protein] phosphodiesterase activity	IEP	Enrichment
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Enrichment
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Enrichment
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001789	Sig_transdc_resp-reg_receiver	5	113
IPR001867	OmpR/PhoB-type_DNA-bd	147	222

External Links

Locus_tag	PAERUG_E11_London_26_VIM_2_06_13_04669

CRP18948 (ompR_3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation