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CRP40950 (ccmH)


Aliases : ccmH

Description : Cytochrome c-type biogenesis protein CcmH precursor [Ensembl]. Cytochrome C biogenesis protein [Interproscan].


Gene families : OG_02_0000892 (OrthoFinder) Phylogenetic Tree(s): OG0000892_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRP40950
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AAC75254 ccmH, b2194 heme lyase, CcmH subunit [Ensembl]. Cytochrome C... 0.09 OrthoFinder
AAL21149 STM2247, ccmH putative heme lyase subunit [Ensembl]. Cytochrome C... 0.05 OrthoFinder
AGT23929 N559_2217 putative subunit of heme lyase [Ensembl].... 0.06 OrthoFinder
AGT23930 N559_2218 subunit of heme lyase [Ensembl]. 0.06 OrthoFinder
EDJ91891 CGSHi22421_09048 cytochrome C-type biogenesis protein [Ensembl].... 0.02 OrthoFinder
EDJ91892 CGSHi22421_09053 TPR-repeat-containing protein [Ensembl]. 0.02 OrthoFinder
KNA59636 VCV51_032536 cytochrome C biogenesis protein [Ensembl]. Cytochrome C... 0.05 OrthoFinder
KNA59637 VCV51_031375, CcmI cytochrome c-type biogenesis protein CcmI [Ensembl]. 0.08 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006081 cellular aldehyde metabolic process IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Enrichment
BP GO:0017004 cytochrome complex assembly IEP Enrichment
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Enrichment
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Enrichment
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Enrichment
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
InterPro domains Description Start Stop
IPR005616 CcmH/CycL/Ccl2/NrfF 9 151
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_05309