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CRP49862 (rfbB)


Aliases : rfbB

Description : dTDP-glucose 4,6-dehydratase [Ensembl]. GDP-mannose 4 [Interproscan].


Gene families : OG_02_0000257 (OrthoFinder) Phylogenetic Tree(s): OG0000257_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRP49862
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AAK99126 spr0322, cpsN dTDP-glucose-4,6-dehydratase [Ensembl]. GDP-mannose 4... 0.02 OrthoFinder
AAT48213 rffG, b3788 dTDP-glucose 4,6-dehydratase [Ensembl]. GDP-mannose 4... 0.03 OrthoFinder
AHY40342 CJ8421_05650 hypothetical protein [Ensembl]. GDP-mannose 4 [Interproscan]. 0.03 OrthoFinder
CCL18094 spsJ, BN171_210030 putative dTDP-glucose 4,6-dehydratase [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0008830 dTDP-4-dehydrorhamnose 3,5-epimerase activity IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
BP GO:0016999 antibiotic metabolic process IEP Enrichment
BP GO:0017000 antibiotic biosynthetic process IEP Enrichment
BP GO:0017144 drug metabolic process IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
BP GO:0030259 lipid glycosylation IEP Enrichment
BP GO:0032784 regulation of DNA-templated transcription, elongation IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 4 324
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_05596