- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : fliN
Description : Flagellar motor switch protein FliN [Ensembl]. Type III flagellar switch regulator (C-ring) FliN C-term [Interproscan].
Gene families : OG_02_0000511 (OrthoFinder) Phylogenetic Tree(s): OG0000511_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: CRP58134 | |
| Cluster | HCCA: Cluster_48 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC75013 | fliN, b1946 | flagellar motor switching and energizing component... | 0.1 | OrthoFinder | |
| AAL20889 | STM1977, fliN | flagellar biosynthesis protein [Ensembl]. Flagellar... | 0.15 | OrthoFinder | |
| AKI48646 | fliN-1, L2625_00714 | flagellar motor switch protein, putative [Ensembl].... | 0.04 | OrthoFinder | |
| AKI48651 | fliN-2, L2625_00719 | flagellar motor switch protein, putative [Ensembl].... | 0.05 | OrthoFinder | |
| AKI48653 | L2625_00721 | flagellar motor switch domain protein [Ensembl]. Surface... | 0.04 | OrthoFinder | |
| CCL18278 | fliN, BN171_220030 | Flagellar motor switch phosphatase FliN [Ensembl]. Type... | 0.05 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Enrichment |
| BP | GO:0001539 | cilium or flagellum-dependent cell motility | IEP | Enrichment |
| MF | GO:0003697 | single-stranded DNA binding | IEP | Enrichment |
| MF | GO:0003774 | motor activity | IEP | Enrichment |
| MF | GO:0004040 | amidase activity | IEP | Enrichment |
| MF | GO:0005198 | structural molecule activity | IEP | Enrichment |
| BP | GO:0006605 | protein targeting | IEP | Enrichment |
| BP | GO:0006612 | protein targeting to membrane | IEP | Enrichment |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Enrichment |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Enrichment |
| BP | GO:0006886 | intracellular protein transport | IEP | Enrichment |
| BP | GO:0006928 | movement of cell or subcellular component | IEP | Enrichment |
| BP | GO:0006935 | chemotaxis | IEP | Enrichment |
| BP | GO:0007165 | signal transduction | IEP | Enrichment |
| CC | GO:0009288 | bacterial-type flagellum | IEP | Enrichment |
| CC | GO:0009425 | bacterial-type flagellum basal body | IEP | Enrichment |
| CC | GO:0009428 | bacterial-type flagellum basal body, distal rod, P ring | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Enrichment |
| BP | GO:0018142 | protein-DNA covalent cross-linking | IEP | Enrichment |
| BP | GO:0018143 | nucleic acid-protein covalent cross-linking | IEP | Enrichment |
| BP | GO:0030030 | cell projection organization | IEP | Enrichment |
| CC | GO:0030288 | outer membrane-bounded periplasmic space | IEP | Enrichment |
| BP | GO:0033365 | protein localization to organelle | IEP | Enrichment |
| BP | GO:0034613 | cellular protein localization | IEP | Enrichment |
| BP | GO:0035556 | intracellular signal transduction | IEP | Enrichment |
| BP | GO:0040011 | locomotion | IEP | Enrichment |
| BP | GO:0042330 | taxis | IEP | Enrichment |
| BP | GO:0044781 | bacterial-type flagellum organization | IEP | Enrichment |
| BP | GO:0045047 | protein targeting to ER | IEP | Enrichment |
| BP | GO:0046907 | intracellular transport | IEP | Enrichment |
| BP | GO:0048870 | cell motility | IEP | Enrichment |
| BP | GO:0051641 | cellular localization | IEP | Enrichment |
| BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
| BP | GO:0051668 | localization within membrane | IEP | Enrichment |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Enrichment |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Enrichment |
| BP | GO:0071973 | bacterial-type flagellum-dependent cell motility | IEP | Enrichment |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | Enrichment |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Enrichment |
| BP | GO:0072657 | protein localization to membrane | IEP | Enrichment |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | Enrichment |
| BP | GO:0097588 | archaeal or bacterial-type flagellum-dependent cell motility | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001543 | SpoA | 78 | 147 |
| Locus_tag | PAERUG_E11_London_26_VIM_2_06_13_05818 |