Aliases : cspA_4
Description : Major cold shock protein CspA [Ensembl]. 'Cold-shock' DNA-binding domain [Interproscan].
Gene families : OG_02_0000056 (OrthoFinder) Phylogenetic Tree(s): OG0000056_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: CRP63148 | |
Cluster | HCCA: Cluster_38 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC73724 | cspE, b0623 | constitutive cold shock family transcription... | 0.04 | OrthoFinder | |
AAC74630 | cspB, b1557 | Qin prophage; cold shock protein [Ensembl]. 'Cold-shock'... | 0.04 | OrthoFinder | |
CCL17057 | cspA, BN171_1130011 | Cold shock protein [Ensembl]. 'Cold-shock' DNA-binding... | 0.03 | OrthoFinder | |
CCL17522 | cspB, BN171_1540001 | Cold shock protein CspB [Ensembl]. 'Cold-shock'... | 0.02 | OrthoFinder | |
CPC31752 | cspA, ERS093114_00015 | CSD family cold shock protein [Ensembl]. 'Cold-shock'... | 0.03 | OrthoFinder | |
KNA53869 | VCV51_033237, CspD | cold shock domain-containing protein CspD [Ensembl].... | 0.04 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0010564 | regulation of cell cycle process | IEP | Enrichment |
BP | GO:0032954 | regulation of cytokinetic process | IEP | Enrichment |
BP | GO:0032955 | regulation of division septum assembly | IEP | Enrichment |
BP | GO:0044087 | regulation of cellular component biogenesis | IEP | Enrichment |
BP | GO:0051128 | regulation of cellular component organization | IEP | Enrichment |
BP | GO:0051301 | cell division | IEP | Enrichment |
BP | GO:0051726 | regulation of cell cycle | IEP | Enrichment |
BP | GO:1901891 | regulation of cell septum assembly | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002059 | CSP_DNA-bd | 7 | 68 |
Locus_tag | PAERUG_E11_London_26_VIM_2_06_13_06000 |