Aliases : OG1RF_10430
Description : RpiR family phosphosugar-binding transcriptional regulator [Ensembl]. SIS domain, Helix-turn-helix domain [Interproscan].
Gene families : OG_02_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AEA93117 | |
Cluster | HCCA: Cluster_2 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AGT23902 | N559_2190 | putative transcriptional regulator [Ensembl]. SIS domain... | 0.03 | OrthoFinder | |
AKI48471 | L2625_00533 | SIS domain protein [Ensembl]. Sugar isomerase (SIS),... | 0.03 | OrthoFinder | |
CCL19528 | BN171_3210001 | Transcriptional regulator, RpiR family [Ensembl].... | 0.03 | OrthoFinder | |
CPC96072 | ybbH_1, ERS093114_01732 | RpiR family transcriptional regulator [Ensembl]. SIS... | 0.02 | OrthoFinder | |
CPD10616 | ybbH_2, ERS093114_02049 | RpiR family transcriptional regulator [Ensembl]. SIS... | 0.04 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
MF | GO:0097367 | carbohydrate derivative binding | IEA | Interproscan |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004668 | protein-arginine deiminase activity | IEP | Enrichment |
MF | GO:0005215 | transporter activity | IEP | Enrichment |
MF | GO:0005267 | potassium channel activity | IEP | Enrichment |
BP | GO:0006534 | cysteine metabolic process | IEP | Enrichment |
BP | GO:0006576 | cellular biogenic amine metabolic process | IEP | Enrichment |
BP | GO:0006595 | polyamine metabolic process | IEP | Enrichment |
BP | GO:0006596 | polyamine biosynthetic process | IEP | Enrichment |
MF | GO:0008484 | sulfuric ester hydrolase activity | IEP | Enrichment |
BP | GO:0009069 | serine family amino acid metabolic process | IEP | Enrichment |
BP | GO:0009092 | homoserine metabolic process | IEP | Enrichment |
BP | GO:0009254 | peptidoglycan turnover | IEP | Enrichment |
BP | GO:0009308 | amine metabolic process | IEP | Enrichment |
BP | GO:0009309 | amine biosynthetic process | IEP | Enrichment |
BP | GO:0009445 | putrescine metabolic process | IEP | Enrichment |
BP | GO:0009446 | putrescine biosynthetic process | IEP | Enrichment |
MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | Enrichment |
CC | GO:0016021 | integral component of membrane | IEP | Enrichment |
MF | GO:0016813 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines | IEP | Enrichment |
MF | GO:0016887 | ATPase | IEP | Enrichment |
BP | GO:0019346 | transsulfuration | IEP | Enrichment |
CC | GO:0019867 | outer membrane | IEP | Enrichment |
MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
CC | GO:0031224 | intrinsic component of membrane | IEP | Enrichment |
BP | GO:0042401 | cellular biogenic amine biosynthetic process | IEP | Enrichment |
BP | GO:0044106 | cellular amine metabolic process | IEP | Enrichment |
BP | GO:0050667 | homocysteine metabolic process | IEP | Enrichment |
CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
No external refs found! |