- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : cph2_9
Description : Bacteriophytochrome cph2 [Ensembl]. EAL domain, CHASE4 domain, Diguanylate cyclase [Interproscan].
Gene families : OG_02_0000015 (OrthoFinder) Phylogenetic Tree(s): OG0000015_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: CRP68033 | |
| Cluster | HCCA: Cluster_21 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| CCP44112 | Rv1354c | Conserved hypothetical protein [Ensembl]. EAL domain,... | 0.03 | OrthoFinder | |
| KNA51140 | VCV51_033633 | GGDEF domain-containing protein [Ensembl]. Diguanylate... | 0.06 | OrthoFinder | |
| KNA54673 | VCV51_030759 | EAL domain-containing protein [Ensembl]. EAL domain,... | 0.07 | OrthoFinder | |
| KNA58560 | VCV51_031144 | EAL domain-containing protein [Ensembl]. EAL domain, PAS... | 0.04 | OrthoFinder | |
| KNA59389 | VCV51_031301 | EAL domain-containing protein [Ensembl]. EAL domain,... | 0.06 | OrthoFinder | |
| KNA60707 | VCV51_032146 | EAL domain-containing protein [Ensembl]. EAL domain,... | 0.07 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Enrichment |
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Enrichment |
| MF | GO:0004057 | arginyltransferase activity | IEP | Enrichment |
| MF | GO:0004129 | cytochrome-c oxidase activity | IEP | Enrichment |
| MF | GO:0004375 | glycine dehydrogenase (decarboxylating) activity | IEP | Enrichment |
| MF | GO:0004672 | protein kinase activity | IEP | Enrichment |
| MF | GO:0004673 | protein histidine kinase activity | IEP | Enrichment |
| MF | GO:0005507 | copper ion binding | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Enrichment |
| BP | GO:0006544 | glycine metabolic process | IEP | Enrichment |
| BP | GO:0006546 | glycine catabolic process | IEP | Enrichment |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0006783 | heme biosynthetic process | IEP | Enrichment |
| BP | GO:0006784 | heme A biosynthetic process | IEP | Enrichment |
| BP | GO:0006935 | chemotaxis | IEP | Enrichment |
| BP | GO:0007165 | signal transduction | IEP | Enrichment |
| MF | GO:0009055 | electron transfer activity | IEP | Enrichment |
| BP | GO:0009071 | serine family amino acid catabolic process | IEP | Enrichment |
| MF | GO:0015002 | obsolete heme-copper terminal oxidase activity | IEP | Enrichment |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | Enrichment |
| CC | GO:0016020 | membrane | IEP | Enrichment |
| CC | GO:0016021 | integral component of membrane | IEP | Enrichment |
| MF | GO:0016301 | kinase activity | IEP | Enrichment |
| BP | GO:0016598 | protein arginylation | IEP | Enrichment |
| MF | GO:0016642 | oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor | IEP | Enrichment |
| MF | GO:0016675 | oxidoreductase activity, acting on a heme group of donors | IEP | Enrichment |
| MF | GO:0016740 | transferase activity | IEP | Enrichment |
| MF | GO:0016755 | aminoacyltransferase activity | IEP | Enrichment |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Enrichment |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Enrichment |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Enrichment |
| MF | GO:0020037 | heme binding | IEP | Enrichment |
| BP | GO:0022900 | electron transport chain | IEP | Enrichment |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Enrichment |
| BP | GO:0035556 | intracellular signal transduction | IEP | Enrichment |
| BP | GO:0040011 | locomotion | IEP | Enrichment |
| BP | GO:0042168 | heme metabolic process | IEP | Enrichment |
| BP | GO:0042330 | taxis | IEP | Enrichment |
| MF | GO:0043169 | cation binding | IEP | Enrichment |
| BP | GO:0046148 | pigment biosynthetic process | IEP | Enrichment |
| BP | GO:0046160 | heme a metabolic process | IEP | Enrichment |
| MF | GO:0046872 | metal ion binding | IEP | Enrichment |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Enrichment |
| MF | GO:0050568 | protein-glutamine glutaminase activity | IEP | Enrichment |
| BP | GO:0050789 | regulation of biological process | IEP | Enrichment |
| BP | GO:0050794 | regulation of cellular process | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Enrichment |
| MF | GO:0140299 | small molecule sensor activity | IEP | Enrichment |
| Locus_tag | PAERUG_E11_London_26_VIM_2_06_13_06121 |