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Aliases : pleD_6
Description : Stalked cell differentiation-controlling protein [Ensembl]. Diguanylate cyclase [Interproscan].
Gene families : OG_02_0000013 (OrthoFinder) Phylogenetic Tree(s): OG0000013_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: CRP73142 | |
| Cluster | HCCA: Cluster_59 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AGT26512 | N559_4928 | hypothetical protein [Ensembl]. GGDEF domain, Cache... | 0.03 | OrthoFinder | |
| CCL17140 | BN171_1330001 | Two-component sensor histidine kinase [Ensembl].... | 0.03 | OrthoFinder | |
| CCL17605 | BN171_1610001 | Putative diguanylate kinase signaling protein [Ensembl].... | 0.03 | OrthoFinder | |
| CCL17606 | BN171_1610002 | Putative diguanylate kinase signaling protein [Ensembl].... | 0.05 | OrthoFinder | |
| CRO93456 | ydaM_1 | putative diguanylate cyclase YdaM [Ensembl]. PAS fold,... | 0.03 | OrthoFinder | |
| KNA53037 | VCV51_031592 | GGDEF domain-containing protein [Ensembl]. PAS fold, PAS... | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004177 | aminopeptidase activity | IEP | Enrichment |
| MF | GO:0004611 | phosphoenolpyruvate carboxykinase activity | IEP | Enrichment |
| BP | GO:0006099 | tricarboxylic acid cycle | IEP | Enrichment |
| MF | GO:0008716 | D-alanine-D-alanine ligase activity | IEP | Enrichment |
| MF | GO:0008964 | phosphoenolpyruvate carboxylase activity | IEP | Enrichment |
| BP | GO:0015977 | carbon fixation | IEP | Enrichment |
| MF | GO:0016874 | ligase activity | IEP | Enrichment |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Enrichment |
| MF | GO:0016881 | acid-amino acid ligase activity | IEP | Enrichment |
| MF | GO:0030145 | manganese ion binding | IEP | Enrichment |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Enrichment |
| MF | GO:0071949 | FAD binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000160 | GGDEF_dom | 511 | 667 |
| Locus_tag | PAERUG_E11_London_26_VIM_2_06_13_06296 |