CRP78779 (dmlR_35)


Aliases : dmlR_35

Description : D-malate degradation protein R [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].


Gene families : OG_02_0000007 (OrthoFinder) Phylogenetic Tree(s): OG0000007_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRP78779
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AAC74410 pgrR, b1328 murein peptide degradation regulator [Ensembl]. LysR... 0.04 OrthoFinder
AGT22104 N559_0282 putative LysR-family transcriptional regulator... 0.04 OrthoFinder
AGT22561 N559_0770 LysR family transcriptional regulator [Ensembl]. LysR... 0.04 OrthoFinder
AGT23535 N559_1799 LysR substrate binding domain protein [Ensembl]. LysR... 0.03 OrthoFinder
AGT23963 N559_2260 LysR family transcriptional regulator [Ensembl]. LysR... 0.02 OrthoFinder
AGT24568 N559_2901 LysR family transcriptional regulator [Ensembl]. LysR... 0.05 OrthoFinder
AGT24866 N559_3206 LysR substrate binding domain protein [Ensembl]. LysR... 0.06 OrthoFinder
AGT24929 N559_3271 putative LysR-family transcriptional regulator... 0.03 OrthoFinder
AGT25823 N559_4198 LysR family transcriptional regulator [Ensembl]. LysR... 0.03 OrthoFinder
AGT26014 N559_4407 putative HTH-type transcriptional regulator [Ensembl].... 0.05 OrthoFinder
AKP14845 dmlR_2, WX61_00778 HTH-type transcriptional regulator DmlR [Ensembl]. LysR... 0.02 OrthoFinder
CRO13028 dmlR_8 D-malate degradation protein R [Ensembl]. LysR substrate... 0.03 OrthoFinder
CRO42652 dmlR_14 D-malate degradation protein R [Ensembl]. LysR substrate... 0.04 OrthoFinder
KNA59999 VCV51_032411 LysR substrate binding domain-containing protein... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
InterPro domains Description Start Stop
IPR005119 LysR_subst-bd 94 296
IPR000847 Tscrpt_reg_HTH_LysR 10 67