1. Home
  2. Species
  3. Vibrio cholerae
  4. Sequence
  5. KNA47917

KNA47917 (VCV51_033865)


Aliases : VCV51_033865

Description : vibriobactin and enterobactin ABC transporter [Ensembl]. ABC transporter [Interproscan].


Gene families : OG_02_0000025 (OrthoFinder) Phylogenetic Tree(s): OG0000025_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA47917
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AAC73262 fhuC, b0151 iron(3+)-hydroxamate import ABC transporter ATPase... 0.02 OrthoFinder
AAC73689 fepC, b0588 ferrienterobactin ABC transporter ATPase [Ensembl]. ABC... 0.07 OrthoFinder
AAC77243 fecE, b4287 ferric citrate ABC transporter ATPase [Ensembl]. ABC... 0.02 OrthoFinder
AAL19156 STM0192, fhuC hydroxymate-dependent iron transport [Ensembl]. ABC... 0.06 OrthoFinder
AAL19541 STM0590, fepC enterobactin transporter [Ensembl]. ABC transporter... 0.07 OrthoFinder
AAL21742 STM2862, sitB fur regulated Salmonella iron transporter [Ensembl]. ABC... 0.04 OrthoFinder
AGT22912 N559_1143, HmuV hemin import ATP-binding protein HmuV [Ensembl]. 0.05 OrthoFinder
AGT22924 N559_1155 manganese/iron transporter ATP-binding protein [Ensembl]. 0.05 OrthoFinder
AGT23849 N559_2133 iron(III) dicitrate transport ATP-binding protein [Ensembl]. 0.03 OrthoFinder
AGT23898 N559_2186 achromobactin ABC superfamily ATP binding cassette... 0.05 OrthoFinder
AGT25358 N559_3720 iron-enterobactin transporter ATP-binding protein [Ensembl]. 0.08 OrthoFinder
AGT25869 N559_4249 iron-hydroxamate transporter ATP-binding subunit [Ensembl]. 0.09 OrthoFinder
AGT26710 N559_5136, FecE iron(III) dicitrate ABC transporter, ATP-binding protein... 0.02 OrthoFinder
AHY40789 CJ8421_08085 hemin ABC transporter, ATP-binding protein [Ensembl].... 0.04 OrthoFinder
CCG26639 SitB Manganese ABC transporter, ATP-binding protein SitB... 0.06 OrthoFinder
CCG27596 No alias Heme ABC transporter (Streptococcus), ATP-binding... 0.04 OrthoFinder
CPC49526 yusV, ERS093114_00618 Iron compound ABC uptake transporter ATP-binding protein... 0.03 OrthoFinder
CPC52712 fhuA, ERS093114_00706 Ferrichrome transport ATP-binding protein fhuA... 0.04 OrthoFinder
CRO22204 hmuV Hemin import ATP-binding protein HmuV [Ensembl]. ABC... 0.04 OrthoFinder
CRO48874 fhuC Iron(3+)-hydroxamate import ATP-binding protein FhuC... 0.01 OrthoFinder
CRO60564 yusV putative siderophore transport system ATP-binding... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016887 ATPase IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
BP GO:0008616 queuosine biosynthetic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009119 ribonucleoside metabolic process IEP Enrichment
BP GO:0009163 nucleoside biosynthetic process IEP Enrichment
BP GO:0009235 cobalamin metabolic process IEP Enrichment
BP GO:0009236 cobalamin biosynthetic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0042455 ribonucleoside biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043094 cellular metabolic compound salvage IEP Enrichment
BP GO:0043174 nucleoside salvage IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0046116 queuosine metabolic process IEP Enrichment
BP GO:0046500 S-adenosylmethionine metabolic process IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1901659 glycosyl compound biosynthetic process IEP Enrichment
BP GO:1990397 queuosine salvage IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 36 129
No external refs found!