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  5. KNA49061

KNA49061 (VCV51_033836)


Aliases : VCV51_033836

Description : ribosomal protein S18 [Ensembl]. Ribosomal protein S18 [Interproscan].


Gene families : OG_02_0000330 (OrthoFinder) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA49061
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AAC77159 rpsR, b4202 30S ribosomal subunit protein S18 [Ensembl]. Ribosomal... 0.21 OrthoFinder
AAL23213 STM4393, rpsR 30S ribosomal subunit protein S18 [Ensembl]. Ribosomal... 0.21 OrthoFinder
ADK87142 rpsR, MPNE_0262 ribosomal protein S18 [Ensembl]. Ribosomal protein S18... 0.1 OrthoFinder
AEA92696 rpsR, OG1RF_10009 30S ribosomal protein S18 [Ensembl]. Ribosomal protein... 0.12 OrthoFinder
AGT26291 N559_4699 30S ribosomal protein S18 [Ensembl]. 0.07 OrthoFinder
AHY40278 rpsR, CJ8421_05330 30S ribosomal protein S18 [Ensembl]. Ribosomal protein... 0.06 OrthoFinder
AKI48022 rpsR, L2625_00047 ribosomal protein S18 [Ensembl]. Ribosomal protein S18... 0.13 OrthoFinder
AKP14205 rpsR, WX61_00116 30S ribosomal protein S18 [Ensembl]. Ribosomal protein... 0.02 OrthoFinder
CCG26822 No alias SSU ribosomal protein S18p @ SSU ribosomal protein S18p,... 0.05 OrthoFinder
CPC89687 rpsR, ERS093114_01560 30S ribosomalprotein S18p [Ensembl]. Ribosomal protein... 0.19 OrthoFinder
CRO53994 rpsR 30S ribosomal protein S18 [Ensembl]. Ribosomal protein... 0.07 OrthoFinder
EDJ91446 rpsR, CGSHi22421_06742 30S ribosomal protein S18 [Ensembl]. Ribosomal protein... 0.16 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR001648 Ribosomal_S18 19 68
No external refs found!