KNA49105 (VCV51_030245)

Aliases : VCV51_030245

Description : N-acetylmuramoyl-L-alanine amidase [Ensembl]. LysM domain, AMIN domain, N-acetylmuramoyl-L-alanine amidase [Interproscan].

Gene families : OG_02_0000159 (OrthoFinder) Phylogenetic Tree(s): OG0000159_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: KNA49105
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AAC75856 amiC, b2817 N-acetylmuramoyl-L-alanine amidase [Ensembl]. AMIN... 0.02 OrthoFinder
AAL21344 STM2450, amiA N-acetylmuramoyl-l-alanine amidase I [Ensembl].... 0.04 OrthoFinder
AAL21867 STM2991, amiC N-acetylmuramoyl-L-alanine amidase [Ensembl]. AMIN... 0.03 OrthoFinder
AAL23178 STM4358, amiB N-acetylmuramoyl-l-alanine amidase II [Ensembl].... 0.06 OrthoFinder
AGT22798 N559_1014 N-acetylmuramoyl-L-alanine amidase [Ensembl]. AMIN... 0.04 OrthoFinder
AHY40472 CJ8421_06325 N-acetylmuramoyl-L-alanine amidase [Ensembl]. AMIN... 0.03 OrthoFinder
AKP14569 amiC, WX61_00488 N-acetylmuramoyl-L-alanine amidase AmiC precursor... 0.03 OrthoFinder
EDJ91211 CGSHi22421_01794 N-acetylmuramoyl-L-alanine amidase [Ensembl]. LysM... 0.08 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0009253 peptidoglycan catabolic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
MF GO:0008144 drug binding IEP Enrichment
BP GO:0008360 regulation of cell shape IEP Enrichment
MF GO:0008658 penicillin binding IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Enrichment
BP GO:0022604 regulation of cell morphogenesis IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0033293 monocarboxylic acid binding IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
MF GO:0045301 tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050793 regulation of developmental process IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055070 copper ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0070206 protein trimerization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR021731 AMIN_dom 40 141
IPR018392 LysM_dom 418 460
IPR018392 LysM_dom 537 579
IPR018392 LysM_dom 484 526
IPR002508 MurNAc-LAA_cat 177 396
No external refs found!