Coexpression cluster: Cluster_1 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0042398 cellular modified amino acid biosynthetic process 2.74% (4/146) 4.32 1.2e-05 0.003583
GO:0006575 cellular modified amino acid metabolic process 2.74% (4/146) 4.06 3.5e-05 0.005207
GO:0071704 organic substance metabolic process 17.81% (26/146) 1.12 9.2e-05 0.009197
GO:1901576 organic substance biosynthetic process 8.9% (13/146) 1.58 0.000335 0.012559
GO:0044249 cellular biosynthetic process 8.9% (13/146) 1.6 0.000278 0.013904
GO:0003674 molecular_function 32.88% (48/146) 0.66 0.000334 0.014331
GO:0042558 pteridine-containing compound metabolic process 2.05% (3/146) 4.23 0.000244 0.014639
GO:0016070 RNA metabolic process 4.79% (7/146) 2.24 0.000534 0.016015
GO:0008152 metabolic process 17.81% (26/146) 0.97 0.000509 0.016982
GO:0044237 cellular metabolic process 15.07% (22/146) 1.17 0.000227 0.016998
GO:0046483 heterocycle metabolic process 10.27% (15/146) 1.34 0.000698 0.019049
GO:1901360 organic cyclic compound metabolic process 10.27% (15/146) 1.32 0.000805 0.020127
GO:0065008 regulation of biological quality 1.37% (2/146) 4.64 0.001591 0.022732
GO:0006426 glycyl-tRNA aminoacylation 1.37% (2/146) 4.64 0.001591 0.022732
GO:0042559 pteridine-containing compound biosynthetic process 1.37% (2/146) 4.64 0.001591 0.022732
GO:0009396 folic acid-containing compound biosynthetic process 1.37% (2/146) 4.64 0.001591 0.022732
GO:0015940 pantothenate biosynthetic process 1.37% (2/146) 4.64 0.001591 0.022732
GO:0015939 pantothenate metabolic process 1.37% (2/146) 4.64 0.001591 0.022732
GO:0019752 carboxylic acid metabolic process 4.79% (7/146) 1.93 0.002052 0.022803
GO:0043436 oxoacid metabolic process 4.79% (7/146) 1.93 0.002052 0.022803
GO:0009110 vitamin biosynthetic process 2.05% (3/146) 3.42 0.001953 0.023431
GO:0006767 water-soluble vitamin metabolic process 2.05% (3/146) 3.42 0.001953 0.023431
GO:0042364 water-soluble vitamin biosynthetic process 2.05% (3/146) 3.42 0.001953 0.023431
GO:0006766 vitamin metabolic process 2.05% (3/146) 3.42 0.001953 0.023431
GO:0006807 nitrogen compound metabolic process 13.7% (20/146) 1.07 0.001056 0.024372
GO:0034641 cellular nitrogen compound metabolic process 10.96% (16/146) 1.12 0.002418 0.025907
GO:0006082 organic acid metabolic process 4.79% (7/146) 1.87 0.00264 0.027315
GO:0009058 biosynthetic process 8.9% (13/146) 1.37 0.001357 0.029086
GO:0018130 heterocycle biosynthetic process 4.11% (6/146) 2.02 0.003085 0.029858
GO:0008610 lipid biosynthetic process 2.05% (3/146) 3.23 0.003033 0.030329
GO:0006725 cellular aromatic compound metabolic process 9.59% (14/146) 1.28 0.00159 0.031807
GO:1901362 organic cyclic compound biosynthetic process 4.11% (6/146) 1.94 0.004054 0.036857
GO:0090304 nucleic acid metabolic process 6.85% (10/146) 1.4 0.004217 0.037206
GO:0034660 ncRNA metabolic process 3.42% (5/146) 2.16 0.004471 0.037261
GO:0006760 folic acid-containing compound metabolic process 1.37% (2/146) 4.06 0.004648 0.037686
GO:1901564 organonitrogen compound metabolic process 9.59% (14/146) 1.14 0.004034 0.037822
GO:0044255 cellular lipid metabolic process 2.05% (3/146) 3.06 0.004417 0.037857
GO:0019438 aromatic compound biosynthetic process 3.42% (5/146) 2.06 0.00608 0.047996
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Campylobacter jejuni HCCA Cluster_1 0.038 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_3 0.028 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_7 0.029 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_8 0.036 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_13 0.027 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_14 0.034 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_2 0.032 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_8 0.027 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_12 0.03 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_26 0.034 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_27 0.039 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_30 0.028 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_38 0.04 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_2 0.04 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_12 0.029 OrthoFinder Compare
Escherichia coli HCCA Cluster_23 0.027 OrthoFinder Compare
Escherichia coli HCCA Cluster_29 0.05 OrthoFinder Compare
Escherichia coli HCCA Cluster_37 0.028 OrthoFinder Compare
Escherichia coli HCCA Cluster_39 0.043 OrthoFinder Compare
Escherichia coli HCCA Cluster_40 0.041 OrthoFinder Compare
Escherichia coli HCCA Cluster_41 0.065 OrthoFinder Compare
Escherichia coli HCCA Cluster_44 0.027 OrthoFinder Compare
Escherichia coli HCCA Cluster_45 0.049 OrthoFinder Compare
Escherichia coli HCCA Cluster_47 0.042 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_3 0.051 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_7 0.046 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_9 0.032 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_11 0.04 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_12 0.028 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_18 0.044 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_19 0.031 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_22 0.032 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_1 0.033 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_12 0.039 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_14 0.044 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_2 0.042 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_26 0.074 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_29 0.044 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_40 0.034 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_44 0.058 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_45 0.029 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_46 0.042 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_10 0.04 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_18 0.038 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_20 0.033 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_24 0.053 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_26 0.03 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_5 0.027 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_7 0.051 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_8 0.063 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_11 0.027 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_12 0.042 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_17 0.032 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_22 0.035 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_34 0.044 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_35 0.08 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_40 0.034 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_47 0.033 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_49 0.029 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_51 0.046 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_62 0.031 OrthoFinder Compare
Salmonella enterica HCCA Cluster_3 0.031 OrthoFinder Compare
Salmonella enterica HCCA Cluster_31 0.1 OrthoFinder Compare
Salmonella enterica HCCA Cluster_32 0.054 OrthoFinder Compare
Salmonella enterica HCCA Cluster_41 0.034 OrthoFinder Compare
Salmonella enterica HCCA Cluster_42 0.071 OrthoFinder Compare
Salmonella enterica HCCA Cluster_45 0.064 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_5 0.048 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_2 0.034 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_3 0.033 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_18 0.037 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_4 0.036 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_11 0.035 OrthoFinder Compare
Sequences (146) (download table)

InterPro Domains

GO Terms

Family Terms