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  5. KNA49493

KNA49493 (VCV51_030301)


Aliases : VCV51_030301

Description : coproporphyrinogen III oxidase [Ensembl]. HemN C-terminal domain, Radical SAM superfamily [Interproscan].


Gene families : OG_02_0000324 (OrthoFinder) Phylogenetic Tree(s): OG0000324_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA49493
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AAC75992 hemW, b2955 HemN family putative oxidoreductase [Ensembl]. HemN... 0.04 OrthoFinder
AAL21979 STM3104, yggW putative oxidase [Ensembl]. HemN C-terminal domain,... 0.11 OrthoFinder
AGT22634 N559_0844 coproporphyrinogen III oxidase [Ensembl]. HemN... 0.07 OrthoFinder
AKP15608 hemN_2, WX61_01569 Oxygen-independent coproporphyrinogen-III oxidase 1... 0.03 OrthoFinder
EDJ91530 CGSHi22421_07162 coproporphyrinogen III oxidase [Ensembl]. HemN... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
MF GO:0008990 rRNA (guanine-N2-)-methyltransferase activity IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016435 rRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0043768 S-ribosylhomocysteine lyase activity IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR010723 HemN_C 314 374
IPR007197 rSAM 11 181
No external refs found!