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Aliases : VCV51_030277, MreC
Description : rod shape-determining protein MreC [Ensembl]. rod shape-determining protein MreC [Interproscan].
Gene families : OG_02_0000907 (OrthoFinder) Phylogenetic Tree(s): OG0000907_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: KNA50246 | |
| Cluster | HCCA: Cluster_1 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC76282 | mreC, b3250 | cell wall structural complex MreBCD transmembrane... | 0.05 | OrthoFinder | |
| AAL22242 | STM3373, mreC | rod shape-determining protein [Ensembl]. rod... | 0.04 | OrthoFinder | |
| AGT22316 | N559_0512, MreC | rod shape-determining protein MreC [Ensembl]. | 0.03 | OrthoFinder | |
| AKI49544 | mreC, L2625_01650 | rod shape-determining protein [Ensembl]. Rod... | 0.04 | OrthoFinder | |
| CRP11515 | mreC | Rod shape-determining protein MreC [Ensembl]. rod... | 0.03 | OrthoFinder | |
| EDJ91244 | CGSHi22421_01959 | rod shape-determining protein [Ensembl]. rod... | 0.05 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0008360 | regulation of cell shape | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000270 | peptidoglycan metabolic process | IEP | Enrichment |
| MF | GO:0003690 | double-stranded DNA binding | IEP | Enrichment |
| BP | GO:0006027 | glycosaminoglycan catabolic process | IEP | Enrichment |
| BP | GO:0006298 | mismatch repair | IEP | Enrichment |
| BP | GO:0006553 | lysine metabolic process | IEP | Enrichment |
| MF | GO:0008813 | chorismate lyase activity | IEP | Enrichment |
| BP | GO:0009085 | lysine biosynthetic process | IEP | Enrichment |
| BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEP | Enrichment |
| BP | GO:0009253 | peptidoglycan catabolic process | IEP | Enrichment |
| BP | GO:0009396 | folic acid-containing compound biosynthetic process | IEP | Enrichment |
| MF | GO:0016833 | oxo-acid-lyase activity | IEP | Enrichment |
| BP | GO:0030203 | glycosaminoglycan metabolic process | IEP | Enrichment |
| MF | GO:0030983 | mismatched DNA binding | IEP | Enrichment |
| BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0042592 | homeostatic process | IEP | Enrichment |
| MF | GO:0043772 | acyl-phosphate glycerol-3-phosphate acyltransferase activity | IEP | Enrichment |
| BP | GO:0046451 | diaminopimelate metabolic process | IEP | Enrichment |
| BP | GO:0048878 | chemical homeostasis | IEP | Enrichment |
| MF | GO:0050380 | undecaprenyl-diphosphatase activity | IEP | Enrichment |
| BP | GO:0050801 | ion homeostasis | IEP | Enrichment |
| BP | GO:0055065 | metal ion homeostasis | IEP | Enrichment |
| BP | GO:0055070 | copper ion homeostasis | IEP | Enrichment |
| BP | GO:0055076 | transition metal ion homeostasis | IEP | Enrichment |
| BP | GO:0055080 | cation homeostasis | IEP | Enrichment |
| BP | GO:0070206 | protein trimerization | IEP | Enrichment |
| BP | GO:0098771 | inorganic ion homeostasis | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007221 | MreC | 123 | 269 |
| No external refs found! |