- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : VCV51_030278, MreD
Description : rod shape-determining protein MreD [Ensembl]. rod shape-determining protein MreD [Interproscan].
Gene families : OG_02_0001676 (OrthoFinder) Phylogenetic Tree(s): OG0001676_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: KNA50247 | |
| Cluster | HCCA: Cluster_1 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC76281 | mreD, b3249 | cell wall structural complex MreBCD transmembrane... | 0.05 | OrthoFinder | |
| EDJ91243 | CGSHi22421_01954 | rod shape-determining protein MreD [Ensembl]. rod... | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0016021 | integral component of membrane | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006298 | mismatch repair | IEP | Enrichment |
| BP | GO:0006553 | lysine metabolic process | IEP | Enrichment |
| BP | GO:0008360 | regulation of cell shape | IEP | Enrichment |
| MF | GO:0008813 | chorismate lyase activity | IEP | Enrichment |
| BP | GO:0009085 | lysine biosynthetic process | IEP | Enrichment |
| BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEP | Enrichment |
| CC | GO:0009360 | DNA polymerase III complex | IEP | Enrichment |
| MF | GO:0016833 | oxo-acid-lyase activity | IEP | Enrichment |
| BP | GO:0022603 | regulation of anatomical structure morphogenesis | IEP | Enrichment |
| BP | GO:0022604 | regulation of cell morphogenesis | IEP | Enrichment |
| CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
| BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Enrichment |
| CC | GO:0042575 | DNA polymerase complex | IEP | Enrichment |
| BP | GO:0042592 | homeostatic process | IEP | Enrichment |
| MF | GO:0043772 | acyl-phosphate glycerol-3-phosphate acyltransferase activity | IEP | Enrichment |
| BP | GO:0046451 | diaminopimelate metabolic process | IEP | Enrichment |
| CC | GO:0048500 | signal recognition particle | IEP | Enrichment |
| BP | GO:0048878 | chemical homeostasis | IEP | Enrichment |
| MF | GO:0050380 | undecaprenyl-diphosphatase activity | IEP | Enrichment |
| BP | GO:0050793 | regulation of developmental process | IEP | Enrichment |
| BP | GO:0050801 | ion homeostasis | IEP | Enrichment |
| BP | GO:0055065 | metal ion homeostasis | IEP | Enrichment |
| BP | GO:0055070 | copper ion homeostasis | IEP | Enrichment |
| BP | GO:0055076 | transition metal ion homeostasis | IEP | Enrichment |
| BP | GO:0055080 | cation homeostasis | IEP | Enrichment |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Enrichment |
| BP | GO:0065008 | regulation of biological quality | IEP | Enrichment |
| BP | GO:0098771 | inorganic ion homeostasis | IEP | Enrichment |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | Enrichment |
| CC | GO:1902494 | catalytic complex | IEP | Enrichment |
| CC | GO:1990234 | transferase complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007227 | Cell_shape_determining_MreD | 7 | 154 |
| No external refs found! |