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  5. KNA50249

KNA50249 (VCV51_030280)


Aliases : VCV51_030280

Description : rne/Rng family ribonuclease [Ensembl]. S1 RNA binding domain, Ribonuclease E/G family [Interproscan].


Gene families : OG_02_0001675 (OrthoFinder) Phylogenetic Tree(s): OG0001675_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA50249
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AAC76279 rng, b3247 ribonuclease G [Ensembl]. S1 RNA binding domain,... 0.04 OrthoFinder
AAL22239 STM3370, cafA RNase G [Ensembl]. S1 RNA binding domain, Ribonuclease... 0.05 OrthoFinder
AGT22319 N559_0515 ribonuclease G [Ensembl]. S1 RNA binding domain,... 0.03 OrthoFinder
AKP15430 rng, WX61_01383 Ribonuclease G [Ensembl]. Ribonuclease E/G family [Interproscan]. 0.06 OrthoFinder
CRP11430 rng Ribonuclease G [Ensembl]. S1 RNA binding domain,... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003714 transcription corepressor activity IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006171 cAMP biosynthetic process IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
MF GO:0016989 sigma factor antagonist activity IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0042157 lipoprotein metabolic process IEP Enrichment
BP GO:0042158 lipoprotein biosynthetic process IEP Enrichment
MF GO:0043768 S-ribosylhomocysteine lyase activity IEP Enrichment
BP GO:0046058 cAMP metabolic process IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0052652 cyclic purine nucleotide metabolic process IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003029 S1_domain 38 109
IPR019307 RNA-bd_AU-1/RNase_E/G 124 393
No external refs found!