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KNA50318 (VCV51_031442)


Aliases : VCV51_031442

Description : vibrio chemotaxis protein [Ensembl]. HAMP domain, Cache domain, Methyl-accepting chemotaxis protein (MCP) signalling domain [Interproscan].


Gene families : OG_02_0000014 (OrthoFinder) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA50318
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AHY39701 CJ8421_02240 MCP-type signal transduction protein [Ensembl].... 0.05 OrthoFinder
CCL20420 BN171_440008 Putative methyl-accepting chemotaxis receptor,MCP family... 0.05 OrthoFinder
CRN86838 bdlA_1 Chemotaxis regulator BdlA [Ensembl]. PAS domain,... 0.05 OrthoFinder
CRN97729 mcp4_1 Methyl-accepting chemotaxis protein 4 [Ensembl]. HAMP... 0.02 OrthoFinder
CRO48648 yoaH_1 Putative methyl-accepting chemotaxis protein YoaH... 0.06 OrthoFinder
CRO53420 mcp4_2 Methyl-accepting chemotaxis protein 4 [Ensembl]. HAMP... 0.05 OrthoFinder
CRO88726 mcpB_3 hypothetical protein [Ensembl]. Type IV pili... 0.03 OrthoFinder
CRO98313 tar_1 Aspartate chemoreceptor protein [Ensembl]. HAMP domain,... 0.06 OrthoFinder
CRP03424 mcpB_4 hypothetical protein [Ensembl]. HAMP domain,... 0.04 OrthoFinder
CRP37830 tar_2 Aspartate chemoreceptor protein [Ensembl]. PAS domain,... 0.06 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
BP GO:0001539 cilium or flagellum-dependent cell motility IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0016598 protein arginylation IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0040011 locomotion IEP Enrichment
BP GO:0044780 bacterial-type flagellum assembly IEP Enrichment
BP GO:0048870 cell motility IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:0071973 bacterial-type flagellum-dependent cell motility IEP Enrichment
BP GO:0097588 archaeal or bacterial-type flagellum-dependent cell motility IEP Enrichment
InterPro domains Description Start Stop
IPR004089 MCPsignal_dom 407 589
IPR003660 HAMP_dom 289 342
IPR033479 dCache_1 33 254
No external refs found!