Coexpression cluster: Cluster_6 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0007165 signal transduction 15.72% (25/159) 2.84 0.0 0.0
GO:0000160 phosphorelay signal transduction system 11.32% (18/159) 2.78 0.0 0.0
GO:0035556 intracellular signal transduction 11.32% (18/159) 2.78 0.0 0.0
GO:0065007 biological regulation 18.24% (29/159) 1.82 0.0 0.0
GO:0050789 regulation of biological process 18.24% (29/159) 1.82 0.0 0.0
GO:0050794 regulation of cellular process 17.61% (28/159) 1.8 0.0 0.0
GO:0016020 membrane 10.69% (17/159) 1.91 2e-06 3.5e-05
GO:0031224 intrinsic component of membrane 8.81% (14/159) 1.65 0.000106 0.001769
GO:0016021 integral component of membrane 8.81% (14/159) 1.65 0.000106 0.001769
GO:0110165 cellular anatomical entity 12.58% (20/159) 1.26 0.000194 0.002914
GO:0005575 cellular_component 12.58% (20/159) 1.16 0.0005 0.006824
GO:0009987 cellular process 22.64% (36/159) 0.65 0.002841 0.035516
GO:0042330 taxis 1.26% (2/159) 3.94 0.005502 0.048549
GO:0006935 chemotaxis 1.26% (2/159) 3.94 0.005502 0.048549
GO:0051723 protein methylesterase activity 1.26% (2/159) 3.94 0.005502 0.048549
GO:0008984 protein-glutamate methylesterase activity 1.26% (2/159) 3.94 0.005502 0.048549
GO:0008199 ferric iron binding 1.26% (2/159) 3.94 0.005502 0.048549
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Clostridioides difficile HCCA Cluster_4 0.03 OrthoFinder Compare
Escherichia coli HCCA Cluster_5 0.028 OrthoFinder Compare
Escherichia coli HCCA Cluster_7 0.031 OrthoFinder Compare
Escherichia coli HCCA Cluster_28 0.028 OrthoFinder Compare
Escherichia coli HCCA Cluster_34 0.05 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_24 0.031 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_6 0.031 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_5 0.035 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_15 0.03 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_19 0.033 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_21 0.068 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_33 0.033 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_48 0.03 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_50 0.034 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_59 0.027 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_62 0.03 OrthoFinder Compare
Salmonella enterica HCCA Cluster_14 0.049 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_15 0.037 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_33 0.036 OrthoFinder Compare
Sequences (159) (download table)

InterPro Domains

GO Terms

Family Terms