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  5. KNA50402

KNA50402 (VCV51_031428)


Aliases : VCV51_031428

Description : sigma-54 interaction domain-containing protein [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Flagellar regulatory protein FleQ [Interproscan].


Gene families : OG_02_0000008 (OrthoFinder) Phylogenetic Tree(s): OG0000008_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA50402
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC75773 fhlA, b2731 formate hydrogenlyase transcriptional activator... 0.03 OrthoFinder
AAL20600 STM1683, tyrR transcriptional regulator of aromatic amino acid... 0.04 OrthoFinder
AAL21739 STM2859, fhlA formate hydrogen-lyase transcriptional activator for... 0.04 OrthoFinder
AGT23137 N559_1375 putative 2-component transcriptional regulator... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008134 transcription factor binding IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006643 membrane lipid metabolic process IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0006664 glycolipid metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
MF GO:0008882 [glutamate-ammonia-ligase] adenylyltransferase activity IEP Enrichment
BP GO:0009245 lipid A biosynthetic process IEP Enrichment
BP GO:0009247 glycolipid biosynthetic process IEP Enrichment
BP GO:0009311 oligosaccharide metabolic process IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP Enrichment
BP GO:0046467 membrane lipid biosynthetic process IEP Enrichment
BP GO:0046493 lipid A metabolic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:1901269 lipooligosaccharide metabolic process IEP Enrichment
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Enrichment
BP GO:1903509 liposaccharide metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR002197 HTH_Fis 444 484
IPR002078 Sigma_54_int 137 304
IPR010518 FleQ 6 115
No external refs found!