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  5. KNA51822

KNA51822 (VCV51_033509)


Aliases : VCV51_033509

Description : ribosomal protein S16 [Ensembl]. Ribosomal protein S16 [Interproscan].


Gene families : OG_02_0000374 (OrthoFinder) Phylogenetic Tree(s): OG0000374_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA51822
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AAC75658 rpsP, b2609 30S ribosomal subunit protein S16 [Ensembl]. Ribosomal... 0.21 OrthoFinder
AAK99486 spr0682, rpsP 30S Ribosomal protein S16 [Ensembl]. Ribosomal protein... 0.12 OrthoFinder
AAL21565 STM2676, rpsP 30S ribosomal subunit protein S16 [Ensembl]. Ribosomal... 0.24 OrthoFinder
ADK87236 rpsP, MPNE_0770 ribosomal protein S16 [Ensembl]. Ribosomal protein S16... 0.04 OrthoFinder
AEA94094 rpsP, OG1RF_11407 30S ribosomal protein S16 [Ensembl]. Ribosomal protein... 0.12 OrthoFinder
AGT23084 N559_1322 30S ribosomal protein S16 [Ensembl]. 0.14 OrthoFinder
CCG26795 No alias SSU ribosomal protein S16p [Ensembl]. Ribosomal protein... 0.06 OrthoFinder
CCL17407 rpsP, BN171_1490001 30S ribosomal protein S16 [Ensembl]. Ribosomal protein... 0.04 OrthoFinder
CCP45711 rpsP, Rv2909c 30S ribosomal protein S16 RpsP [Ensembl]. Ribosomal... 0.07 OrthoFinder
CPC35905 rpsP, ERS093114_00186 30S ribosomal protein S16 [Ensembl]. Ribosomal protein... 0.08 OrthoFinder
CRO16871 rpsP 30S ribosomal protein S16 [Ensembl]. Ribosomal protein... 0.12 OrthoFinder
EDJ90616 CGSHi22421_01387 30S ribosomal protein S16 [Ensembl]. Ribosomal protein... 0.08 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR000307 Ribosomal_S16 8 68
No external refs found!