Coexpression cluster: Cluster_24 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043039 tRNA aminoacylation 6.96% (11/158) 3.53 0.0 0.0
GO:0043038 amino acid activation 6.96% (11/158) 3.53 0.0 0.0
GO:0006399 tRNA metabolic process 6.96% (11/158) 3.4 0.0 0.0
GO:0016070 RNA metabolic process 8.23% (13/158) 3.02 0.0 0.0
GO:0006418 tRNA aminoacylation for protein translation 6.33% (10/158) 3.53 0.0 0.0
GO:0034660 ncRNA metabolic process 6.96% (11/158) 3.18 0.0 0.0
GO:0003723 RNA binding 6.96% (11/158) 3.13 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 16.46% (26/158) 1.71 0.0 1e-06
GO:0043170 macromolecule metabolic process 15.82% (25/158) 1.71 0.0 2e-06
GO:0044237 cellular metabolic process 18.99% (30/158) 1.5 0.0 3e-06
GO:1901564 organonitrogen compound metabolic process 14.56% (23/158) 1.74 0.0 4e-06
GO:0006520 cellular amino acid metabolic process 6.96% (11/158) 2.82 0.0 4e-06
GO:0043436 oxoacid metabolic process 7.59% (12/158) 2.59 0.0 6e-06
GO:0019752 carboxylic acid metabolic process 7.59% (12/158) 2.59 0.0 6e-06
GO:0006082 organic acid metabolic process 7.59% (12/158) 2.53 1e-06 9e-06
GO:0044281 small molecule metabolic process 9.49% (15/158) 2.01 3e-06 4.6e-05
GO:0006518 peptide metabolic process 6.33% (10/158) 2.53 5e-06 6.5e-05
GO:0043043 peptide biosynthetic process 6.33% (10/158) 2.53 5e-06 6.5e-05
GO:0097159 organic cyclic compound binding 15.82% (25/158) 1.4 5e-06 6.8e-05
GO:1901363 heterocyclic compound binding 15.82% (25/158) 1.4 5e-06 6.8e-05
GO:0044238 primary metabolic process 17.09% (27/158) 1.32 6e-06 7e-05
GO:0005488 binding 20.25% (32/158) 1.18 6e-06 7.1e-05
GO:0043603 cellular amide metabolic process 6.33% (10/158) 2.46 8e-06 8e-05
GO:0043604 amide biosynthetic process 6.33% (10/158) 2.46 8e-06 8e-05
GO:0006807 nitrogen compound metabolic process 16.46% (26/158) 1.33 7e-06 8.3e-05
GO:0034645 cellular macromolecule biosynthetic process 6.96% (11/158) 2.32 8e-06 8.4e-05
GO:0009059 macromolecule biosynthetic process 6.96% (11/158) 2.26 1.1e-05 0.000111
GO:0006412 translation 5.7% (9/158) 2.49 1.9e-05 0.00018
GO:0071704 organic substance metabolic process 18.35% (29/158) 1.17 2e-05 0.000182
GO:0008152 metabolic process 19.62% (31/158) 1.11 2.1e-05 0.000189
GO:0003676 nucleic acid binding 9.49% (15/158) 1.76 2.4e-05 0.000208
GO:0090304 nucleic acid metabolic process 8.86% (14/158) 1.77 4.4e-05 0.000373
GO:0140101 catalytic activity, acting on a tRNA 2.53% (4/158) 3.94 4.8e-05 0.000387
GO:0044267 cellular protein metabolic process 5.7% (9/158) 2.31 5.6e-05 0.00044
GO:0009982 pseudouridine synthase activity 3.16% (5/158) 3.27 8.9e-05 0.00068
GO:0006139 nucleobase-containing compound metabolic process 10.13% (16/158) 1.52 0.000109 0.000812
GO:0016853 isomerase activity 4.43% (7/158) 2.48 0.000175 0.001269
GO:0044271 cellular nitrogen compound biosynthetic process 6.96% (11/158) 1.76 0.000314 0.002223
GO:0003674 molecular_function 32.28% (51/158) 0.64 0.000362 0.002499
GO:0006725 cellular aromatic compound metabolic process 10.13% (16/158) 1.36 0.000397 0.002672
GO:0005525 GTP binding 3.16% (5/158) 2.85 0.000424 0.002715
GO:0016866 intramolecular transferase activity 3.16% (5/158) 2.85 0.000424 0.002715
GO:0046483 heterocycle metabolic process 10.13% (16/158) 1.32 0.000542 0.003393
GO:0044249 cellular biosynthetic process 8.23% (13/158) 1.49 0.000603 0.003688
GO:1901360 organic cyclic compound metabolic process 10.13% (16/158) 1.3 0.000631 0.003769
GO:1901576 organic substance biosynthetic process 8.23% (13/158) 1.46 0.000722 0.004222
GO:1901566 organonitrogen compound biosynthetic process 6.96% (11/158) 1.61 0.000766 0.004387
GO:0009058 biosynthetic process 8.86% (14/158) 1.36 0.000927 0.005194
GO:0140098 catalytic activity, acting on RNA 3.16% (5/158) 2.53 0.001307 0.006893
GO:0019001 guanyl nucleotide binding 3.16% (5/158) 2.53 0.001307 0.006893
GO:0032561 guanyl ribonucleotide binding 3.16% (5/158) 2.53 0.001307 0.006893
GO:0019538 protein metabolic process 5.7% (9/158) 1.65 0.001892 0.009253
GO:0002161 aminoacyl-tRNA editing activity 1.27% (2/158) 4.53 0.001865 0.009288
GO:0030261 chromosome condensation 1.27% (2/158) 4.53 0.001865 0.009288
GO:0006323 DNA packaging 1.27% (2/158) 4.53 0.001865 0.009288
GO:1901265 nucleoside phosphate binding 6.33% (10/158) 1.53 0.002094 0.009882
GO:0000166 nucleotide binding 6.33% (10/158) 1.53 0.002094 0.009882
GO:0016043 cellular component organization 3.16% (5/158) 2.27 0.003113 0.014439
GO:0051276 chromosome organization 1.9% (3/158) 3.11 0.003802 0.016764
GO:0071103 DNA conformation change 1.9% (3/158) 3.11 0.003802 0.016764
GO:0071840 cellular component organization or biogenesis 3.16% (5/158) 2.21 0.003758 0.017132
GO:0044260 cellular macromolecule metabolic process 7.59% (12/158) 1.24 0.004225 0.018331
GO:0035639 purine ribonucleoside triphosphate binding 5.06% (8/158) 1.57 0.004773 0.020379
GO:0000049 tRNA binding 1.27% (2/158) 3.94 0.005434 0.02284
GO:0036094 small molecule binding 6.96% (11/158) 1.23 0.006426 0.026592
GO:0032555 purine ribonucleotide binding 5.06% (8/158) 1.48 0.007003 0.028118
GO:0017076 purine nucleotide binding 5.06% (8/158) 1.48 0.007003 0.028118
GO:0009987 cellular process 21.52% (34/158) 0.58 0.008497 0.033613
GO:0032553 ribonucleotide binding 5.06% (8/158) 1.4 0.009946 0.038775
GO:0006996 organelle organization 1.9% (3/158) 2.65 0.010175 0.039103
GO:0006414 translational elongation 1.27% (2/158) 3.53 0.010559 0.040005
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Campylobacter jejuni HCCA Cluster_1 0.04 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_2 0.036 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_7 0.036 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_8 0.063 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_2 0.07 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_15 0.033 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_19 0.033 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_7 0.039 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_12 0.051 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_18 0.064 OrthoFinder Compare
Escherichia coli HCCA Cluster_1 0.078 OrthoFinder Compare
Escherichia coli HCCA Cluster_23 0.031 OrthoFinder Compare
Escherichia coli HCCA Cluster_29 0.087 OrthoFinder Compare
Escherichia coli HCCA Cluster_37 0.051 OrthoFinder Compare
Escherichia coli HCCA Cluster_38 0.04 OrthoFinder Compare
Escherichia coli HCCA Cluster_39 0.034 OrthoFinder Compare
Escherichia coli HCCA Cluster_41 0.067 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_6 0.035 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_7 0.038 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_8 0.055 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_11 0.045 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_14 0.054 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_15 0.033 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_22 0.03 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_1 0.032 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_2 0.033 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_9 0.048 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_14 0.037 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_12 0.062 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_26 0.079 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_34 0.043 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_38 0.03 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_44 0.064 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_54 0.036 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_2 0.034 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_18 0.097 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_24 0.048 OrthoFinder Compare
Mycoplasma pneumoniae HCAA Cluster_1 0.039 OrthoFinder Compare
Mycoplasma pneumoniae HCAA Cluster_5 0.032 OrthoFinder Compare
Mycobacterium tuberculosis HCCA Cluster_25 0.039 OrthoFinder Compare
Mycobacterium tuberculosis HCCA Cluster_28 0.028 OrthoFinder Compare
Mycobacterium tuberculosis HCCA Cluster_37 0.032 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_7 0.041 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_12 0.096 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_16 0.029 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_19 0.029 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_20 0.029 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_22 0.061 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_34 0.051 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_40 0.047 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_51 0.067 OrthoFinder Compare
Salmonella enterica HCCA Cluster_3 0.1 OrthoFinder Compare
Salmonella enterica HCCA Cluster_5 0.031 OrthoFinder Compare
Salmonella enterica HCCA Cluster_23 0.072 OrthoFinder Compare
Salmonella enterica HCCA Cluster_30 0.028 OrthoFinder Compare
Salmonella enterica HCCA Cluster_31 0.063 OrthoFinder Compare
Salmonella enterica HCCA Cluster_42 0.028 OrthoFinder Compare
Salmonella enterica HCCA Cluster_44 0.03 OrthoFinder Compare
Salmonella enterica HCCA Cluster_47 0.046 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_3 0.029 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_5 0.08 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_19 0.056 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_23 0.03 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_24 0.031 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_13 0.088 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_14 0.04 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_18 0.039 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_4 0.04 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_9 0.03 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_11 0.071 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_18 0.034 OrthoFinder Compare
Sequences (158) (download table)

InterPro Domains

GO Terms

Family Terms