1. Home
  2. Species
  3. Vibrio cholerae
  4. Sequence
  5. KNA51873

KNA51873 (VCV51_030403)


Aliases : VCV51_030403

Description : bacterial extracellular solute-binding protein, family 5 [Ensembl]. Bacterial extracellular solute-binding proteins [Interproscan].


Gene families : OG_02_0000055 (OrthoFinder) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA51873
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AAC74376 sapA, b1294 antimicrobial peptide transport ABC transporter... 0.06 OrthoFinder
AAC76501 nikA, b3476 nickel/heme ABC transporter periplasmic binding protein... 0.04 OrthoFinder
AAC76569 dppA, b3544 dipeptide/heme ABC transporter periplasmic binding... 0.07 OrthoFinder
AAK99997 spr1194, appA ABC transporter substrate-binding protein-oligopeptide... 0.05 OrthoFinder
AAL19785 STM0849, yliB putative ABC transporter periplasmic binding protein... 0.03 OrthoFinder
AAL20181 STM1255 putative ABC transporter periplasmic binding protein... 0.04 OrthoFinder
AAL22491 STM3630, dppA dipeptide transport protein [Ensembl]. Bacterial... 0.03 OrthoFinder
AEA95053 opp2A, OG1RF_12366 peptide ABC superfamily ATP binding cassette... 0.05 OrthoFinder
AGT22073 N559_0251 periplasmic dipeptide transport protein precursor... 0.04 OrthoFinder
AGT22123 N559_0304 nickel ABC transporter, periplasmic nickel-binding... 0.05 OrthoFinder
AGT23463 N559_1721 putative ABC transport system periplasmic binding... 0.07 OrthoFinder
AGT24069 N559_2370 dipeptide transport protein [Ensembl]. Solute-binding... 0.04 OrthoFinder
AGT25119 N559_3468 peptide ABC transporter periplasmic substrate-binding... 0.05 OrthoFinder
AGT25383 N559_3745 putative ABC transport system periplasmic dipeptide... 0.04 OrthoFinder
AKI48107 L2625_00134 oligopeptide ABC transporter, oligopeptide-binding... 0.03 OrthoFinder
CCL17024 oppA, BN171_1090005 ABC-type transport system, oligopeptide-family... 0.05 OrthoFinder
CPC43753 oppA_1, ERS093114_00438 Oligopeptide ABC transporter%2C periplasmic... 0.03 OrthoFinder
CPC72064 nikA, ERS093114_01157 peptide ABC transporter peptide-binding protein... 0.05 OrthoFinder
CPD17760 opp-1A, ERS093114_02216 Oligopeptide transporter putative substrate binding... 0.04 OrthoFinder
CRO32936 hbpA Hemin-binding lipoprotein [Ensembl]. Bacterial... 0.03 OrthoFinder
CRP11968 dppA_2 Dipeptide-binding protein [Ensembl]. Bacterial... 0.04 OrthoFinder
CRP11994 dppA_3 Dipeptide-binding protein [Ensembl]. Bacterial... 0.03 OrthoFinder
CRP12075 dppA_4 Dipeptide-binding protein [Ensembl]. Bacterial... 0.06 OrthoFinder
CRP12127 dppA_5 Dipeptide-binding protein [Ensembl]. Bacterial... 0.06 OrthoFinder
EDJ90884 CGSHi22421_03508 ABC-type transport system, periplasmic component,... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
InterPro domains Description Start Stop
IPR000914 SBP_5_dom 75 445
No external refs found!