KNA52478 (VCV51_030140)


Aliases : VCV51_030140

Description : transcriptional regulator [Ensembl]. SIS domain, Helix-turn-helix domain [Interproscan].


Gene families : OG_02_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA52478
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AEA93030 OG1RF_10343 RpiR family transcriptional regulator [Ensembl]. SIS... 0.03 OrthoFinder
AGT26212 N559_4618 putative helix-turn-helix protein [Ensembl]. SIS domain,... 0.04 OrthoFinder
AKI50635 L2625_02846 phosphosugar-binding transcriptional regulator, RpiR... 0.03 OrthoFinder
CPC91357 rpiR, ERS093114_01611 Sialic acid utilization regulator%2C RpiR family... 0.02 OrthoFinder
CPC96072 ybbH_1, ERS093114_01732 RpiR family transcriptional regulator [Ensembl]. SIS... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
BP GO:1901135 carbohydrate derivative metabolic process IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006282 regulation of DNA repair IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051052 regulation of DNA metabolic process IEP Enrichment
BP GO:0080134 regulation of response to stress IEP Enrichment
BP GO:0080135 regulation of cellular response to stress IEP Enrichment
BP GO:2001020 regulation of response to DNA damage stimulus IEP Enrichment
InterPro domains Description Start Stop
IPR000281 HTH_RpiR 1 75
IPR001347 SIS_dom 130 256
No external refs found!