KNA52478 (VCV51_030140)

Aliases : VCV51_030140

Description : transcriptional regulator [Ensembl]. SIS domain, Helix-turn-helix domain [Interproscan].

Gene families : OG_02_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: KNA52478
Cluster	HCCA: Cluster_34

Target	Alias	Description	ECC score	Gene Family Method
AEA93030	OG1RF_10343	RpiR family transcriptional regulator [Ensembl]. SIS...	0.03	OrthoFinder
AGT26212	N559_4618	putative helix-turn-helix protein [Ensembl]. SIS domain,...	0.04	OrthoFinder
AKI50635	L2625_02846	phosphosugar-binding transcriptional regulator, RpiR...	0.03	OrthoFinder
CPC91357	rpiR, ERS093114_01611	Sialic acid utilization regulator%2C RpiR family...	0.02	OrthoFinder
CPC96072	ybbH_1, ERS093114_01732	RpiR family transcriptional regulator [Ensembl]. SIS...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	IEA	Interproscan
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006270	DNA replication initiation	IEP	Enrichment
BP	GO:0006282	regulation of DNA repair	IEP	Enrichment
MF	GO:0016872	intramolecular lyase activity	IEP	Enrichment
BP	GO:0048583	regulation of response to stimulus	IEP	Enrichment
BP	GO:0051052	regulation of DNA metabolic process	IEP	Enrichment
BP	GO:0080134	regulation of response to stress	IEP	Enrichment
BP	GO:0080135	regulation of cellular response to stress	IEP	Enrichment
BP	GO:2001020	regulation of response to DNA damage stimulus	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000281	HTH_RpiR	1	75
IPR001347	SIS_dom	130	256

External Links

No external refs found!