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  5. KNA52746

KNA52746 (VCV51_031536)


Aliases : VCV51_031536

Description : ApbE family protein [Ensembl]. ApbE family [Interproscan].


Gene families : OG_02_0000760 (OrthoFinder) Phylogenetic Tree(s): OG0000760_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA52746
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AKP14494 apbE_2, WX61_00412 Thiamine biosynthesis lipoprotein ApbE precursor... 0.04 OrthoFinder
CCG27484 ApbE Hypothetical similar to thiamin biosynthesis lipoprotein... 0.04 OrthoFinder
CRO91645 apbE Thiamine biosynthesis lipoprotein ApbE precursor... 0.04 OrthoFinder
EDJ90576 CGSHi22421_01187 lipoprotein [Ensembl]. ApbE family [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0017013 protein flavinylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003911 DNA ligase (NAD+) activity IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
CC GO:0009360 DNA polymerase III complex IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
CC GO:0042575 DNA polymerase complex IEP Enrichment
BP GO:0043165 Gram-negative-bacterium-type cell outer membrane assembly IEP Enrichment
MF GO:0045301 tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071709 membrane assembly IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR024932 ApbE 53 331
No external refs found!