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  5. KNA53744

KNA53744 (VCV51_033270)


Aliases : VCV51_033270

Description : His/Glu/Gln/Arg/opine family amino ABC transporter [Ensembl]. Binding-protein-dependent transport system inner membrane component [Interproscan].


Gene families : OG_02_0000016 (OrthoFinder) Phylogenetic Tree(s): OG0000016_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA53744
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AAC73754 gltK, b0653 glutamate/aspartate ABC transporter permease [Ensembl].... 0.03 OrthoFinder
AAC73949 artQ, b0862 arginine ABC transporter permease [Ensembl].... 0.06 OrthoFinder
AAC74985 tcyL, b1918 ABC family putative inner membrane permease [Ensembl].... 0.04 OrthoFinder
AAK99213 spr0409, glnH ABC transporter substrate binding protein-glutamine... 0.02 OrthoFinder
AAK99428 spr0624, glnP ABC transporter membrane-spanning permease-glutamine... 0.03 OrthoFinder
AAK99531 spr0727, glnP ABC transporter membrane-spanning permease-glutamine... 0.03 OrthoFinder
AAL19614 STM0663, gltK glutamate/aspartate transporter [Ensembl].... 0.04 OrthoFinder
AAL19765 STM0829, glnP glutamine high-affinity transporter [Ensembl].... 0.03 OrthoFinder
AAL19824 STM0889, artQ arginine 3rd transport system [Ensembl].... 0.03 OrthoFinder
AEA92878 OG1RF_10191 amino acid ABC superfamily ATP binding cassette... 0.05 OrthoFinder
AGT23904 N559_2192 amino acid ABC transporter [Ensembl]. transmembrane... 0.03 OrthoFinder
AGT25284 N559_3642 glutamate/aspartate ABC superfamily ATP binding cassette... 0.03 OrthoFinder
AKI49734 L2625_01875 amino acid ABC transporter, permease protein [Ensembl].... 0.05 OrthoFinder
AKI50281 L2625_02449 polar amino acid ABC transporter, permease protein... 0.03 OrthoFinder
AKI50282 L2625_02450 polar amino acid ABC transporter, permease protein... 0.03 OrthoFinder
AKP14954 yecS, WX61_00888 Inner membrane amino-acid ABC transporter permease... 0.03 OrthoFinder
AKP15748 tcyB, WX61_01713 L-cystine transport system permease protein TcyB... 0.03 OrthoFinder
CBI66166 yckJ, HPB8_609 putative polar amino acid transport system permease... 0.02 OrthoFinder
CCG26411 No alias ABC transporter membrane-spanning permease-glutamine... 0.04 OrthoFinder
CCL16928 BN171_1000002 ABC-type transport system, aminoacid-family permease... 0.06 OrthoFinder
CCL18017 BN171_2030003 ABC-type transport system, aminoacid-family permease... 0.03 OrthoFinder
CCL18563 BN171_2440004 ABC-type transport system,cystine/aminoacid-family... 0.04 OrthoFinder
CCL18564 BN171_2440005 ABC-type transport system,cystine/aminoacid-family... 0.03 OrthoFinder
CPD19910 tcyB, ERS093114_02272 cystine transport system permease protein [Ensembl].... 0.03 OrthoFinder
CPD30896 artQ, ERS093114_02521 extracellular glutamine-binding protein [Ensembl].... 0.03 OrthoFinder
CRO59397 yhdY Inner membrane amino-acid ABC transporter permease... 0.03 OrthoFinder
EDJ90647 CGSHi22421_04038 arginine ABC transporter permease protein [Ensembl].... 0.03 OrthoFinder
EDJ91874 CGSHi22421_08963 ABC-type amino acid transport system permease component... 0.03 OrthoFinder
KNA59811 VCV51_030871 binding-protein-dependent transport system inner... 0.05 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006144 purine nucleobase metabolic process IEP Enrichment
BP GO:0006865 amino acid transport IEP Enrichment
BP GO:0009112 nucleobase metabolic process IEP Enrichment
BP GO:0009113 purine nucleobase biosynthetic process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0015807 L-amino acid transport IEP Enrichment
BP GO:0032784 regulation of DNA-templated transcription, elongation IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
CC GO:0042597 periplasmic space IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0046112 nucleobase biosynthetic process IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
BP GO:0046417 chorismate metabolic process IEP Enrichment
BP GO:0098656 anion transmembrane transport IEP Enrichment
BP GO:1902022 L-lysine transport IEP Enrichment
BP GO:1902475 L-alpha-amino acid transmembrane transport IEP Enrichment
BP GO:1903401 L-lysine transmembrane transport IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 34 218
No external refs found!