KNA53894 (VCV51_030823)

Aliases : VCV51_030823

Description : tryptophan synthase subunit alpha [Ensembl]. Tryptophan synthase alpha chain [Interproscan].

Gene families : OG_02_0000714 (OrthoFinder) Phylogenetic Tree(s): OG0000714_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: KNA53894
Cluster	HCCA: Cluster_30

Target	Alias	Description	ECC score	Gene Family Method
AAC74342	trpA, b1260	tryptophan synthase, alpha subunit [Ensembl]. Tryptophan...	0.05	OrthoFinder
AAL00434	spr1631, trpA	Tryptophan synthase alpha chain [Ensembl]. Tryptophan...	0.04	OrthoFinder
AAL20645	STM1727, trpA	tryptophan synthase, alpha protein [Ensembl]. Tryptophan...	0.06	OrthoFinder
AGT24683	N559_3020	tryptophan synthase subunit alpha [Ensembl].	0.05	OrthoFinder
AHY39605	trpA, CJ8421_01750	tryptophan synthase subunit alpha [Ensembl]. Tryptophan...	0.04	OrthoFinder
AKI49624	trpA, L2625_01734	tryptophan synthase, alpha subunit [Ensembl]. Tryptophan...	0.06	OrthoFinder
CPC32416	trpA, ERS093114_00043	tryptophan synthase subunit alpha [Ensembl]. Tryptophan...	0.09	OrthoFinder
CRP69127	trpA	Tryptophan synthase alpha chain [Ensembl]. Tryptophan...	0.03	OrthoFinder
EDJ91075	CGSHi22421_10052	tryptophan synthase subunit alpha [Ensembl]. Tryptophan...	0.07	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006568	tryptophan metabolic process	IEA	Interproscan
BP	GO:0006576	cellular biogenic amine metabolic process	None	Extended
BP	GO:0006586	indolalkylamine metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009072	aromatic amino acid family metabolic process	None	Extended
BP	GO:0009308	amine metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042430	indole-containing compound metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044106	cellular amine metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004425	indole-3-glycerol-phosphate synthase activity	IEP	Enrichment
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Enrichment
MF	GO:0004645	1,4-alpha-oligoglucan phosphorylase activity	IEP	Enrichment
BP	GO:0005975	carbohydrate metabolic process	IEP	Enrichment
MF	GO:0008080	N-acetyltransferase activity	IEP	Enrichment
MF	GO:0008184	glycogen phosphorylase activity	IEP	Enrichment
MF	GO:0008771	[citrate (pro-3S)-lyase] ligase activity	IEP	Enrichment
MF	GO:0008810	cellulase activity	IEP	Enrichment
MF	GO:0016407	acetyltransferase activity	IEP	Enrichment
MF	GO:0016410	N-acyltransferase activity	IEP	Enrichment
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	Enrichment
MF	GO:0016757	glycosyltransferase activity	IEP	Enrichment
MF	GO:0016758	hexosyltransferase activity	IEP	Enrichment
MF	GO:0016878	acid-thiol ligase activity	IEP	Enrichment
BP	GO:0034219	carbohydrate transmembrane transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002028	Trp_synthase_suA	8	266

External Links

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