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  5. KNA53934

KNA53934 (VCV51_033260)


Aliases : VCV51_033260

Description : excinuclease ABC [Ensembl]. UvrB/uvrC motif, GIY-YIG catalytic domain, Helix-hairpin-helix domain, UvrC Helix-hairpin-helix N-terminal [Interproscan].


Gene families : OG_02_0000678 (OrthoFinder) Phylogenetic Tree(s): OG0000678_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA53934
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAK99347 spr0543, uvrC Exonuclease ABC-subunit C [Ensembl]. UvrB/uvrC motif,... 0.03 OrthoFinder
AAL20858 STM1946, uvrC UvrC [Ensembl]. UvrB/uvrC motif, GIY-YIG catalytic... 0.03 OrthoFinder
AKI49162 uvrC, L2625_01252 excinuclease ABC, C subunit [Ensembl]. UvrC family... 0.05 OrthoFinder
AKP14210 uvrC, WX61_00121 UvrABC system protein C [Ensembl]. UvrB/uvrC motif,... 0.05 OrthoFinder
CRO98609 uvrC Excinuclease ABC subunit C [Ensembl]. UvrB/uvrC motif,... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003911 DNA ligase (NAD+) activity IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0009271 phage shock IEP Enrichment
CC GO:0009360 DNA polymerase III complex IEP Enrichment
MF GO:0009378 four-way junction helicase activity IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
BP GO:0009605 response to external stimulus IEP Enrichment
BP GO:0009607 response to biotic stimulus IEP Enrichment
BP GO:0009615 response to virus IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0017013 protein flavinylation IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
CC GO:0042575 DNA polymerase complex IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
BP GO:0043165 Gram-negative-bacterium-type cell outer membrane assembly IEP Enrichment
BP GO:0043207 response to external biotic stimulus IEP Enrichment
BP GO:0043213 bacteriocin transport IEP Enrichment
MF GO:0045301 tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051707 response to other organism IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071709 membrane assembly IEP Enrichment
BP GO:0098586 cellular response to virus IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001162 UvrC_RNase_H_dom 365 520
IPR001943 UVR_dom 185 216
IPR000305 GIY-YIG_endonuc 2 71
No external refs found!