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  5. KNA54981

KNA54981 (VCV51_033164)


Aliases : VCV51_033164

Description : 30S ribosomal protein S17 [Ensembl]. Ribosomal protein S17 [Interproscan].


Gene families : OG_02_0000567 (OrthoFinder) Phylogenetic Tree(s): OG0000567_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA54981
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AAC76336 rpsQ, b3311 30S ribosomal subunit protein S17 [Ensembl]. Ribosomal... 0.33 OrthoFinder
AAK99002 spr0198, rpsQ 30S Ribosomal protein S17 [Ensembl]. Ribosomal protein... 0.25 OrthoFinder
AAL22294 STM3431, rpsQ 30S ribosomal subunit protein S17 [Ensembl]. Ribosomal... 0.41 OrthoFinder
ADK87159 rpsQ, MPNE_0203 30S ribosomal protein S17 [Ensembl]. Ribosomal protein... 0.18 OrthoFinder
AEA92847 rpsQ, OG1RF_10160 30S ribosomal protein S17 [Ensembl]. Ribosomal protein... 0.25 OrthoFinder
AHY40883 rpsQ, CJ8421_08555 30S ribosomal protein S17 [Ensembl]. Ribosomal protein... 0.18 OrthoFinder
AKI50558 rpsQ, L2625_02768 ribosomal protein S17 [Ensembl]. Ribosomal protein... 0.22 OrthoFinder
AKP15132 rpsQ, WX61_01078 30S ribosomal protein S17 [Ensembl]. Ribosomal protein... 0.12 OrthoFinder
CBI65726 rpsQ, HPB8_169 small subunit ribosomal protein S17 [Ensembl]. Ribosomal... 0.08 OrthoFinder
CCG27388 No alias SSU ribosomal protein S17p (S11e) [Ensembl]. Ribosomal... 0.22 OrthoFinder
CCL20572 rpsQ, BN171_70012 30S ribosomal protein S17 [Ensembl]. Ribosomal protein... 0.22 OrthoFinder
CCP43454 rpsQ, Rv0710 30S ribosomal protein S17 RpsQ [Ensembl]. Ribosomal... 0.12 OrthoFinder
CRO74018 rpsQ 30S ribosomal protein S17 [Ensembl]. Ribosomal protein... 0.26 OrthoFinder
EDJ91363 CGSHi22421_04648 30S ribosomal protein S17 [Ensembl]. Ribosomal protein... 0.26 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0031554 regulation of DNA-templated transcription, termination IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0043244 regulation of protein-containing complex disassembly IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
InterPro domains Description Start Stop
IPR000266 Ribosomal_S17/S11 10 77
No external refs found!