KNA54986 (VCV51_033169)

Aliases : VCV51_033169

Description : ribosomal protein S8 [Ensembl]. Ribosomal protein S8 [Interproscan].

Gene families : OG_02_0000396 (OrthoFinder) Phylogenetic Tree(s): OG0000396_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: KNA54986
Cluster	HCCA: Cluster_8

Target	Alias	Description	ECC score	Gene Family Method
AAC76331	rpsH, b3306	30S ribosomal subunit protein S8 [Ensembl]. Ribosomal...	0.24	OrthoFinder
AAK99007	spr0203, rpsH	30S Ribosomal protein S8 (S8) [Ensembl]. Ribosomal...	0.1	OrthoFinder
AAL22289	STM3426, rpsH	30S ribosomal subunit protein S8, and regulator...	0.28	OrthoFinder
ADK87107	rpsH, MPNE_0208	ribosomal protein S8 [Ensembl]. Ribosomal protein S8...	0.12	OrthoFinder
AEA92852	rpsH, OG1RF_10165	30S ribosomal protein S8 [Ensembl]. Ribosomal protein S8...	0.16	OrthoFinder
AGT22256	N559_0448	30S ribosomal protein S8 [Ensembl].	0.12	OrthoFinder
AHY40878	rpsH, CJ8421_08530	30S ribosomal protein S8 [Ensembl]. Ribosomal protein S8...	0.2	OrthoFinder
AKI50553	rpsH, L2625_02763	ribosomal protein S8 [Ensembl]. Ribosomal protein S8...	0.11	OrthoFinder
AKP15137	rpsH, WX61_01083	30S ribosomal protein S8 [Ensembl]. Ribosomal protein S8...	0.09	OrthoFinder
CBI65731	rpsH, HPB8_174	small subunit ribosomal protein S8 [Ensembl]. Ribosomal...	0.13	OrthoFinder
CCG27393	S15Ae	SSU ribosomal protein S8p (S15Ae) [Ensembl]. Ribosomal...	0.16	OrthoFinder
CCL20577	rpsH, BN171_70017	30S ribosomal protein S8 [Ensembl]. Ribosomal protein S8...	0.18	OrthoFinder
CCP43462	rpsH, Rv0718	30S ribosomal protein S8 RpsH [Ensembl]. Ribosomal...	0.12	OrthoFinder
CPD13989	rpsH, ERS093114_02136	30S ribosomal protein S8 [Ensembl]. Ribosomal protein S8...	0.22	OrthoFinder
CRO74158	rpsH	30S ribosomal protein S8 [Ensembl]. Ribosomal protein S8...	0.21	OrthoFinder
EDJ91370	rpsH, CGSHi22421_04683	30S ribosomal protein S8 [Ensembl]. Ribosomal protein S8...	0.25	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0002161	aminoacyl-tRNA editing activity	IEP	Enrichment
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003697	single-stranded DNA binding	IEP	Enrichment
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0005096	GTPase activator activity	IEP	Enrichment
CC	GO:0005840	ribosome	IEP	Enrichment
BP	GO:0006323	DNA packaging	IEP	Enrichment
MF	GO:0008047	enzyme activator activity	IEP	Enrichment
BP	GO:0016070	RNA metabolic process	IEP	Enrichment
MF	GO:0019239	deaminase activity	IEP	Enrichment
MF	GO:0019843	rRNA binding	IEP	Enrichment
BP	GO:0030261	chromosome condensation	IEP	Enrichment
MF	GO:0030695	GTPase regulator activity	IEP	Enrichment
CC	GO:0043228	non-membrane-bounded organelle	IEP	Enrichment
CC	GO:0043229	intracellular organelle	IEP	Enrichment
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Enrichment
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000630	Ribosomal_S8	5	129

External Links

No external refs found!

KNA54986 (VCV51_033169)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation