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  5. KNA55037

KNA55037 (VCV51_033191, LptA)


Aliases : VCV51_033191, LptA

Description : lipopolysaccharide transport periplasmic protein LptA [Ensembl]. OstA-like protein [Interproscan].


Gene families : OG_02_0001672 (OrthoFinder) Phylogenetic Tree(s): OG0001672_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA55037
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AAC76232 lptA, b3200 lipopolysaccharide export ABC transporter periplasmic... 0.08 OrthoFinder
AAL22187 STM3318, yhbN putative ABC superfamily transport protein [Ensembl].... 0.05 OrthoFinder
AGT22355 N559_0557, LptA lipopolysaccharide transport periplasmic protein LptA [Ensembl]. 0.03 OrthoFinder
CRP09848 lptA Lipopolysaccharide export system protein LptA precursor... 0.04 OrthoFinder
EDJ91953 CGSHi22421_09358 hypothetical protein [Ensembl]. OstA-like protein [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003714 transcription corepressor activity IEP Enrichment
CC GO:0009295 nucleoid IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
MF GO:0016987 sigma factor activity IEP Enrichment
MF GO:0016989 sigma factor antagonist activity IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR005653 OstA-like_N 30 141
No external refs found!