KNA55216 (VCV51_031064)

Aliases : VCV51_031064

Description : ABC-type antimicrobial peptide transport system permease component [Ensembl]. FtsX-like permease family, MacB-like periplasmic core domain [Interproscan].

Gene families : OG_02_0000372 (OrthoFinder) Phylogenetic Tree(s): OG0000372_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: KNA55216
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC73966 macB, b0879 macrolide ABC transporter peremase/ATPase [Ensembl]. ABC... 0.01 OrthoFinder
AAK99499 spr0695 Conserved hypothetical protein [Ensembl]. FtsX-like... 0.02 OrthoFinder
AAL19878 STM0942, ybjZ putative ABC superfamily (atp&memb) transport protein... 0.04 OrthoFinder
AEA94071 OG1RF_11384 permease protein [Ensembl]. FtsX-like permease family,... 0.03 OrthoFinder
AEA94954 OG1RF_12267 permease protein [Ensembl]. FtsX-like permease family,... 0.03 OrthoFinder
AHY39844 CJ8421_02965 Macrolide export ATP-binding/permease MacB [Ensembl].... 0.03 OrthoFinder
AKI48163 L2625_00191 ABC transporter, permease protein [Ensembl]. ABC... 0.03 OrthoFinder
CCL17729 BN171_1740004 ABC-type transport system, permease [Ensembl]. FtsX-like... 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006950 response to stress IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
BP GO:0009271 phage shock IEP Enrichment
CC GO:0009360 DNA polymerase III complex IEP Enrichment
MF GO:0009378 four-way junction helicase activity IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
BP GO:0009605 response to external stimulus IEP Enrichment
BP GO:0009607 response to biotic stimulus IEP Enrichment
BP GO:0009615 response to virus IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0017013 protein flavinylation IEP Enrichment
CC GO:0042575 DNA polymerase complex IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
BP GO:0043165 Gram-negative-bacterium-type cell outer membrane assembly IEP Enrichment
BP GO:0043207 response to external biotic stimulus IEP Enrichment
BP GO:0043213 bacteriocin transport IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051707 response to other organism IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0071709 membrane assembly IEP Enrichment
BP GO:0098586 cellular response to virus IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR003838 ABC3_permease_dom 320 418
IPR025857 MacB_PCD 20 253
No external refs found!