KNA55221 (VCV51_033053)

Aliases : VCV51_033053

Description : lysR family Bacterial regulatory helix-turn-helix protein [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].

Gene families : OG_02_0000277 (OrthoFinder) Phylogenetic Tree(s): OG0000277_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: KNA55221
Cluster	HCCA: Cluster_35

Target	Alias	Description	ECC score	Gene Family Method	Actions
CRN81729	leuO_1	HTH-type transcriptional regulator LeuO [Ensembl]. LysR...	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Enrichment
MF	GO:0004040	amidase activity	IEP	Enrichment
CC	GO:0005575	cellular_component	IEP	Enrichment
BP	GO:0008033	tRNA processing	IEP	Enrichment
CC	GO:0009295	nucleoid	IEP	Enrichment
BP	GO:0010565	regulation of cellular ketone metabolic process	IEP	Enrichment
BP	GO:0015969	guanosine tetraphosphate metabolic process	IEP	Enrichment
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	Enrichment
MF	GO:0016987	sigma factor activity	IEP	Enrichment
BP	GO:0019216	regulation of lipid metabolic process	IEP	Enrichment
BP	GO:0019217	regulation of fatty acid metabolic process	IEP	Enrichment
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Enrichment
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Enrichment
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Enrichment
BP	GO:0034035	purine ribonucleoside bisphosphate metabolic process	IEP	Enrichment
BP	GO:0062012	regulation of small molecule metabolic process	IEP	Enrichment
CC	GO:0110165	cellular anatomical entity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000847	Tscrpt_reg_HTH_LysR	13	72
IPR005119	LysR_subst-bd	100	299

External Links

No external refs found!

KNA55221 (VCV51_033053)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation