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Aliases : VCV51_031075
Description : binding-protein-dependent transport system inner membrane component [Ensembl]. Binding-protein-dependent transport system inner membrane component [Interproscan].
Gene families : OG_02_0000063 (OrthoFinder) Phylogenetic Tree(s): OG0000063_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: KNA55230 | |
| Cluster | HCCA: Cluster_18 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAL00329 | spr1525, ABC-MSP | ABC transporter membrane-spanning permease-sugar... | 0.03 | OrthoFinder | |
| AAL22415 | STM3555, ugpE | sn-glycerol 3-phosphate transport protein [Ensembl].... | 0.01 | OrthoFinder | |
| CRP18444 | araQ | L-arabinose transport system permease protein AraQ... | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000270 | peptidoglycan metabolic process | IEP | Enrichment |
| MF | GO:0003712 | transcription coregulator activity | IEP | Enrichment |
| MF | GO:0003714 | transcription corepressor activity | IEP | Enrichment |
| MF | GO:0003725 | double-stranded RNA binding | IEP | Enrichment |
| BP | GO:0006027 | glycosaminoglycan catabolic process | IEP | Enrichment |
| BP | GO:0006401 | RNA catabolic process | IEP | Enrichment |
| BP | GO:0006402 | mRNA catabolic process | IEP | Enrichment |
| BP | GO:0009056 | catabolic process | IEP | Enrichment |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0009253 | peptidoglycan catabolic process | IEP | Enrichment |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Enrichment |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Enrichment |
| BP | GO:0015969 | guanosine tetraphosphate metabolic process | IEP | Enrichment |
| BP | GO:0016071 | mRNA metabolic process | IEP | Enrichment |
| MF | GO:0016989 | sigma factor antagonist activity | IEP | Enrichment |
| MF | GO:0030145 | manganese ion binding | IEP | Enrichment |
| BP | GO:0030203 | glycosaminoglycan metabolic process | IEP | Enrichment |
| BP | GO:0034035 | purine ribonucleoside bisphosphate metabolic process | IEP | Enrichment |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Enrichment |
| MF | GO:0043169 | cation binding | IEP | Enrichment |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Enrichment |
| BP | GO:0046700 | heterocycle catabolic process | IEP | Enrichment |
| MF | GO:0046872 | metal ion binding | IEP | Enrichment |
| MF | GO:0046914 | transition metal ion binding | IEP | Enrichment |
| BP | GO:0048519 | negative regulation of biological process | IEP | Enrichment |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Enrichment |
| BP | GO:1901575 | organic substance catabolic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000515 | MetI-like | 89 | 275 |
| No external refs found! |