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  5. KNA55278

KNA55278 (VCV51_033091)


Aliases : VCV51_033091

Description : ABC transporter [Ensembl]. ABC transporter transmembrane region [Interproscan].


Gene families : OG_02_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA55278
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AAL00019 spr1215, ABC-N/P ABC transporter ATP-binding/membrane-spanning... 0.03 OrthoFinder
AAL00020 spr1216, ABC-N/P ABC transporter ATP-binding/membrane-spanning... 0.03 OrthoFinder
AAL21579 STM2691 putative ABC transporter transmembrane region [Ensembl].... 0.03 OrthoFinder
AEA93355 ndvA, OG1RF_10668 ABC superfamily ATP binding cassette transporter,... 0.02 OrthoFinder
AKI48557 L2625_00623 ABC transporter, ATP-binding/permease protein [Ensembl].... 0.03 OrthoFinder
AKI48558 L2625_00624 ABC transporter, ATP-binding/permease protein [Ensembl].... 0.03 OrthoFinder
CCL19309 BN171_3020021 ABC-type transport system, multidrug-family... 0.03 OrthoFinder
EDJ91845 CGSHi22421_08818 conserved hypothetical ABC transporter ATP-binding... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016887 ATPase IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Enrichment
BP GO:0006558 L-phenylalanine metabolic process IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009094 L-phenylalanine biosynthetic process IEP Enrichment
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Enrichment
BP GO:0015807 L-amino acid transport IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0046417 chorismate metabolic process IEP Enrichment
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Enrichment
BP GO:0098656 anion transmembrane transport IEP Enrichment
BP GO:1902022 L-lysine transport IEP Enrichment
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Enrichment
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Enrichment
BP GO:1902475 L-alpha-amino acid transmembrane transport IEP Enrichment
BP GO:1903401 L-lysine transmembrane transport IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 38 324
IPR003439 ABC_transporter-like_ATP-bd 388 536
No external refs found!