Coexpression cluster: Cluster_19 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0055086 nucleobase-containing small molecule metabolic process 12.5% (8/64) 3.79 0.0 9e-06
GO:0072522 purine-containing compound biosynthetic process 6.25% (4/64) 4.66 1e-05 0.000788
GO:0009165 nucleotide biosynthetic process 6.25% (4/64) 4.13 5.5e-05 0.001414
GO:1901293 nucleoside phosphate biosynthetic process 6.25% (4/64) 4.13 5.5e-05 0.001414
GO:0072521 purine-containing compound metabolic process 6.25% (4/64) 4.03 7.6e-05 0.001675
GO:0018130 heterocycle biosynthetic process 9.38% (6/64) 3.21 3.5e-05 0.001805
GO:1901362 organic cyclic compound biosynthetic process 9.38% (6/64) 3.13 4.8e-05 0.001848
GO:0044281 small molecule metabolic process 12.5% (8/64) 2.41 0.000104 0.002009
GO:0019438 aromatic compound biosynthetic process 7.81% (5/64) 3.25 0.000144 0.002483
GO:0034654 nucleobase-containing compound biosynthetic process 6.25% (4/64) 3.58 0.000274 0.003035
GO:0090407 organophosphate biosynthetic process 6.25% (4/64) 3.58 0.000274 0.003035
GO:0006753 nucleoside phosphate metabolic process 6.25% (4/64) 3.66 0.000219 0.00309
GO:0009117 nucleotide metabolic process 6.25% (4/64) 3.66 0.000219 0.00309
GO:0006164 purine nucleotide biosynthetic process 4.69% (3/64) 4.42 0.000271 0.0035
GO:1901135 carbohydrate derivative metabolic process 7.81% (5/64) 2.87 0.000516 0.00533
GO:0009123 nucleoside monophosphate metabolic process 3.12% (2/64) 5.25 0.000899 0.005573
GO:0009168 purine ribonucleoside monophosphate biosynthetic process 3.12% (2/64) 5.25 0.000899 0.005573
GO:0009161 ribonucleoside monophosphate metabolic process 3.12% (2/64) 5.25 0.000899 0.005573
GO:0009156 ribonucleoside monophosphate biosynthetic process 3.12% (2/64) 5.25 0.000899 0.005573
GO:0009126 purine nucleoside monophosphate metabolic process 3.12% (2/64) 5.25 0.000899 0.005573
GO:0009124 nucleoside monophosphate biosynthetic process 3.12% (2/64) 5.25 0.000899 0.005573
GO:0009127 purine nucleoside monophosphate biosynthetic process 3.12% (2/64) 5.25 0.000899 0.005573
GO:0009167 purine ribonucleoside monophosphate metabolic process 3.12% (2/64) 5.25 0.000899 0.005573
GO:0046112 nucleobase biosynthetic process 3.12% (2/64) 5.25 0.000899 0.005573
GO:0009112 nucleobase metabolic process 3.12% (2/64) 5.25 0.000899 0.005573
GO:0019637 organophosphate metabolic process 6.25% (4/64) 3.13 0.000964 0.005748
GO:0009987 cellular process 29.69% (19/64) 1.04 0.001146 0.006578
GO:0006163 purine nucleotide metabolic process 4.69% (3/64) 3.72 0.001299 0.007194
GO:0006796 phosphate-containing compound metabolic process 6.25% (4/64) 2.93 0.001677 0.008384
GO:0006793 phosphorus metabolic process 6.25% (4/64) 2.93 0.001677 0.008384
GO:0044271 cellular nitrogen compound biosynthetic process 9.38% (6/64) 2.19 0.001798 0.00871
GO:0006139 nucleobase-containing compound metabolic process 12.5% (8/64) 1.82 0.001643 0.008782
GO:0044249 cellular biosynthetic process 10.94% (7/64) 1.9 0.002405 0.011295
GO:1901576 organic substance biosynthetic process 10.94% (7/64) 1.87 0.002673 0.012187
GO:0006725 cellular aromatic compound metabolic process 12.5% (8/64) 1.66 0.003296 0.014595
GO:0046483 heterocycle metabolic process 12.5% (8/64) 1.62 0.003904 0.016807
GO:1901360 organic cyclic compound metabolic process 12.5% (8/64) 1.6 0.004239 0.017756
GO:0009260 ribonucleotide biosynthetic process 3.12% (2/64) 4.03 0.006012 0.02273
GO:0009152 purine ribonucleotide biosynthetic process 3.12% (2/64) 4.03 0.006012 0.02273
GO:0046390 ribose phosphate biosynthetic process 3.12% (2/64) 4.03 0.006012 0.02273
GO:0009058 biosynthetic process 10.94% (7/64) 1.66 0.005995 0.024453
GO:0044237 cellular metabolic process 15.62% (10/64) 1.22 0.009357 0.034531
GO:1901657 glycosyl compound metabolic process 3.12% (2/64) 3.25 0.017858 0.044645
GO:0009150 purine ribonucleotide metabolic process 3.12% (2/64) 3.25 0.017858 0.044645
GO:0009259 ribonucleotide metabolic process 3.12% (2/64) 3.25 0.017858 0.044645
GO:0019693 ribose phosphate metabolic process 3.12% (2/64) 3.25 0.017858 0.044645
GO:0009116 nucleoside metabolic process 3.12% (2/64) 3.25 0.017858 0.044645
GO:1901137 carbohydrate derivative biosynthetic process 3.12% (2/64) 3.51 0.012454 0.044892
GO:0048472 threonine-phosphate decarboxylase activity 1.56% (1/64) 5.83 0.017544 0.047707
GO:0006189 'de novo' IMP biosynthetic process 1.56% (1/64) 5.83 0.017544 0.047707
GO:0006144 purine nucleobase metabolic process 1.56% (1/64) 5.83 0.017544 0.047707
GO:0009113 purine nucleobase biosynthetic process 1.56% (1/64) 5.83 0.017544 0.047707
GO:0009052 pentose-phosphate shunt, non-oxidative branch 1.56% (1/64) 5.83 0.017544 0.047707
GO:1902022 L-lysine transport 1.56% (1/64) 5.83 0.017544 0.047707
GO:1902475 L-alpha-amino acid transmembrane transport 1.56% (1/64) 5.83 0.017544 0.047707
GO:1903401 L-lysine transmembrane transport 1.56% (1/64) 5.83 0.017544 0.047707
GO:0015807 L-amino acid transport 1.56% (1/64) 5.83 0.017544 0.047707
GO:0006177 GMP biosynthetic process 1.56% (1/64) 5.83 0.017544 0.047707
GO:0046037 GMP metabolic process 1.56% (1/64) 5.83 0.017544 0.047707
GO:1901566 organonitrogen compound biosynthetic process 7.81% (5/64) 1.78 0.014401 0.048527
GO:0008150 biological_process 32.81% (21/64) 0.67 0.014324 0.049339
GO:1901564 organonitrogen compound metabolic process 10.94% (7/64) 1.33 0.020123 0.049508
GO:0034641 cellular nitrogen compound metabolic process 12.5% (8/64) 1.31 0.014072 0.049573
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Clostridioides difficile HCCA Cluster_14 0.061 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_30 0.035 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_38 0.032 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_41 0.027 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_15 0.074 OrthoFinder Compare
Escherichia coli HCCA Cluster_3 0.032 OrthoFinder Compare
Escherichia coli HCCA Cluster_5 0.031 OrthoFinder Compare
Escherichia coli HCCA Cluster_24 0.165 OrthoFinder Compare
Escherichia coli HCCA Cluster_43 0.028 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_5 0.063 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_7 0.028 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_38 0.027 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_40 0.065 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_42 0.027 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_10 0.062 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_19 0.029 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_29 0.028 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_23 0.029 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_43 0.032 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_51 0.028 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_63 0.029 OrthoFinder Compare
Salmonella enterica HCCA Cluster_3 0.034 OrthoFinder Compare
Salmonella enterica HCCA Cluster_31 0.052 OrthoFinder Compare
Salmonella enterica HCCA Cluster_45 0.035 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_3 0.068 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_14 0.052 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_10 0.042 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_17 0.047 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_14 0.053 OrthoFinder Compare
Sequences (64) (download table)

InterPro Domains

GO Terms

Family Terms