KNA55364 (VCV51_031056)


Aliases : VCV51_031056

Description : LysR substrate binding domain-containing protein [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].


Gene families : OG_02_0000002 (OrthoFinder) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA55364
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AGT26606 N559_5029, OxyR DNA-binding transcriptional regulator OxyR [Ensembl].... 0.03 OrthoFinder
AKI48389 L2625_00445 transcriptional regulator, LysR family [Ensembl]. LysR,... 0.02 OrthoFinder
CCL18751 BN171_2600010 Transcriptional regulator, LysR family [Ensembl]. LysR... 0.04 OrthoFinder
CRP45508 benM_8 Ben and cat operon transcriptional regulator [Ensembl].... 0.04 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP Enrichment
BP GO:0006568 tryptophan metabolic process IEP Enrichment
BP GO:0006576 cellular biogenic amine metabolic process IEP Enrichment
BP GO:0006586 indolalkylamine metabolic process IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
BP GO:0042430 indole-containing compound metabolic process IEP Enrichment
BP GO:0044106 cellular amine metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR005119 LysR_subst-bd 83 288
IPR000847 Tscrpt_reg_HTH_LysR 1 57
No external refs found!