Aliases : VCV51_031056
Description : LysR substrate binding domain-containing protein [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].
Gene families : OG_02_0000002 (OrthoFinder) Phylogenetic Tree(s): OG0000002_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: KNA55364 | |
Cluster | HCCA: Cluster_43 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AGT26606 | N559_5029, OxyR | DNA-binding transcriptional regulator OxyR [Ensembl].... | 0.03 | OrthoFinder | |
AKI48389 | L2625_00445 | transcriptional regulator, LysR family [Ensembl]. LysR,... | 0.02 | OrthoFinder | |
CCL18751 | BN171_2600010 | Transcriptional regulator, LysR family [Ensembl]. LysR... | 0.04 | OrthoFinder | |
CRP45508 | benM_8 | Ben and cat operon transcriptional regulator [Ensembl].... | 0.04 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004425 | indole-3-glycerol-phosphate synthase activity | IEP | Enrichment |
MF | GO:0004635 | phosphoribosyl-AMP cyclohydrolase activity | IEP | Enrichment |
BP | GO:0006568 | tryptophan metabolic process | IEP | Enrichment |
BP | GO:0006576 | cellular biogenic amine metabolic process | IEP | Enrichment |
BP | GO:0006586 | indolalkylamine metabolic process | IEP | Enrichment |
BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Enrichment |
BP | GO:0009308 | amine metabolic process | IEP | Enrichment |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Enrichment |
MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Enrichment |
MF | GO:0016831 | carboxy-lyase activity | IEP | Enrichment |
MF | GO:0019238 | cyclohydrolase activity | IEP | Enrichment |
BP | GO:0042430 | indole-containing compound metabolic process | IEP | Enrichment |
BP | GO:0044106 | cellular amine metabolic process | IEP | Enrichment |
No external refs found! |