KNA56243 (VCV51_032979)

Aliases : VCV51_032979

Description : endonuclease III [Ensembl]. Helix-hairpin-helix motif, Iron-sulfur binding domain of endonuclease III, HhH-GPD superfamily base excision DNA repair protein [Interproscan].

Gene families : OG_02_0000527 (OrthoFinder) Phylogenetic Tree(s): OG0000527_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: KNA56243
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAK99960 spr1157, nth endonuclease III (DNA repair) [Ensembl].... 0.02 OrthoFinder
AKP15454 nth, WX61_01408 Endonuclease III [Ensembl]. Helix-hairpin-helix motif,... 0.05 OrthoFinder
CCG26728 No alias Endonuclease III [Ensembl]. Helix-hairpin-helix motif,... 0.03 OrthoFinder
EDJ90330 modC, CGSHi22421_02341 molybdate transporter ATP-binding subunit [Ensembl].... 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006284 base-excision repair IEA Interproscan
MF GO:0051539 4 iron, 4 sulfur cluster binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003714 transcription corepressor activity IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
MF GO:0009378 four-way junction helicase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0016989 sigma factor antagonist activity IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
MF GO:0043768 S-ribosylhomocysteine lyase activity IEP Enrichment
InterPro domains Description Start Stop
IPR003265 HhH-GPD_domain 34 168
IPR000445 HhH_motif 99 127
IPR003651 Endonuclease3_FeS-loop_motif 187 203
No external refs found!