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  5. KNA56388

KNA56388 (VCV51_030672, RodA)


Aliases : VCV51_030672, RodA

Description : rod shape-determining protein RodA [Ensembl]. Cell cycle protein [Interproscan].


Gene families : OG_02_0000072 (OrthoFinder) Phylogenetic Tree(s): OG0000072_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA56388
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC73735 mrdB, b0634 cell wall shape-determining protein [Ensembl]. Cell... 0.03 OrthoFinder
AAL19091 STM0127, ftsW essential cell division gene [Ensembl]. Cell cycle... 0.06 OrthoFinder
AAL19590 STM0639, mrdB rod shape-determining membrane protein; cell elongation... 0.04 OrthoFinder
AGT25298 N559_3656 cell wall shape-determining protein [Ensembl]. 0.05 OrthoFinder
AHY40245 CJ8421_05155 cell division protein FtsW [Ensembl]. Cell cycle protein... 0.04 OrthoFinder
CBI66507 mreB1, HPB8_950 rod shape determining protein RodA [Ensembl]. Cell cycle... 0.03 OrthoFinder
CBI67216 ftsW, HPB8_1659 cell division protein FtsW [Ensembl]. Cell cycle protein... 0.02 OrthoFinder
CCL19113 spoVE, BN171_2870043 Cell division/stage V sporulation protein [Ensembl].... 0.04 OrthoFinder
EDJ91253 CGSHi22421_02004 rod shape-determining protein [Ensembl]. Cell cycle... 0.03 OrthoFinder
EDJ91941 murD, CGSHi22421_09298 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase... 0.07 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0051301 cell division IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003911 DNA ligase (NAD+) activity IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0009271 phage shock IEP Enrichment
CC GO:0009360 DNA polymerase III complex IEP Enrichment
MF GO:0009378 four-way junction helicase activity IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
BP GO:0009605 response to external stimulus IEP Enrichment
BP GO:0009607 response to biotic stimulus IEP Enrichment
BP GO:0009615 response to virus IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0017013 protein flavinylation IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
CC GO:0042575 DNA polymerase complex IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
BP GO:0043165 Gram-negative-bacterium-type cell outer membrane assembly IEP Enrichment
BP GO:0043207 response to external biotic stimulus IEP Enrichment
BP GO:0043213 bacteriocin transport IEP Enrichment
MF GO:0045301 tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051707 response to other organism IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0070206 protein trimerization IEP Enrichment
BP GO:0071709 membrane assembly IEP Enrichment
BP GO:0098586 cellular response to virus IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001182 FtsW/RodA 23 367
No external refs found!