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Aliases : VCV51_032953
Description : rare lipoprotein B [Ensembl]. Lipopolysaccharide-assembly [Interproscan].
Gene families : OG_02_0002262 (OrthoFinder) Phylogenetic Tree(s): OG0002262_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: KNA56393 | |
| Cluster | HCCA: Cluster_11 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AGT25291 | N559_3649 | a minor lipoprotein [Ensembl]. | 0.04 | OrthoFinder | |
| EDJ91711 | leuS, CGSHi22421_08148 | leucyl-tRNA synthetase [Ensembl].... | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0043165 | Gram-negative-bacterium-type cell outer membrane assembly | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003909 | DNA ligase activity | IEP | Enrichment |
| MF | GO:0003911 | DNA ligase (NAD+) activity | IEP | Enrichment |
| BP | GO:0006281 | DNA repair | IEP | Enrichment |
| BP | GO:0006298 | mismatch repair | IEP | Enrichment |
| BP | GO:0006950 | response to stress | IEP | Enrichment |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Enrichment |
| BP | GO:0008643 | carbohydrate transport | IEP | Enrichment |
| BP | GO:0009262 | deoxyribonucleotide metabolic process | IEP | Enrichment |
| BP | GO:0009263 | deoxyribonucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0009271 | phage shock | IEP | Enrichment |
| CC | GO:0009360 | DNA polymerase III complex | IEP | Enrichment |
| BP | GO:0009401 | phosphoenolpyruvate-dependent sugar phosphotransferase system | IEP | Enrichment |
| BP | GO:0009605 | response to external stimulus | IEP | Enrichment |
| BP | GO:0009607 | response to biotic stimulus | IEP | Enrichment |
| BP | GO:0009615 | response to virus | IEP | Enrichment |
| BP | GO:0015833 | peptide transport | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | Enrichment |
| MF | GO:0016887 | ATPase | IEP | Enrichment |
| BP | GO:0017013 | protein flavinylation | IEP | Enrichment |
| BP | GO:0033554 | cellular response to stress | IEP | Enrichment |
| CC | GO:0042575 | DNA polymerase complex | IEP | Enrichment |
| BP | GO:0042886 | amide transport | IEP | Enrichment |
| BP | GO:0043207 | response to external biotic stimulus | IEP | Enrichment |
| BP | GO:0043213 | bacteriocin transport | IEP | Enrichment |
| MF | GO:0045301 | tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity | IEP | Enrichment |
| BP | GO:0050896 | response to stimulus | IEP | Enrichment |
| BP | GO:0051707 | response to other organism | IEP | Enrichment |
| BP | GO:0051716 | cellular response to stimulus | IEP | Enrichment |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Enrichment |
| BP | GO:0070206 | protein trimerization | IEP | Enrichment |
| BP | GO:0098586 | cellular response to virus | IEP | Enrichment |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | Enrichment |
| CC | GO:1902494 | catalytic complex | IEP | Enrichment |
| CC | GO:1990234 | transferase complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007485 | LPS_assembly_LptE | 50 | 161 |
| No external refs found! |