KNA56410 (VCV51_032965)

Aliases : VCV51_032965

Description : Cu(I)-responsive transcriptional regulator [Ensembl]. MerR family regulatory protein [Interproscan].

Gene families : OG_02_0000020 (OrthoFinder) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: KNA56410
Cluster	HCCA: Cluster_32

Target	Alias	Description	ECC score	Gene Family Method
AGT23758	N559_2037	transcriptional regulator, MerR family [Ensembl]. TipAS...	0.06	OrthoFinder
AGT25570	N559_3935	copper responsive transcription regulator [Ensembl]....	0.04	OrthoFinder
CCL19650	BN171_3340017	Transcriptional regulator, MerR family [Ensembl]. MerR...	0.04	OrthoFinder
CCL20103	BN171_3690047	Transcriptional regulator, MerR family [Ensembl]. MerR...	0.03	OrthoFinder
CRO14981	zntR_3	Zn(II)-responsive regulator of zntA [Ensembl]. MerR HTH...	0.03	OrthoFinder
CRO96571	cueR_2	Copper export regulator [Ensembl]. MerR HTH family...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000270	peptidoglycan metabolic process	IEP	Enrichment
MF	GO:0003712	transcription coregulator activity	IEP	Enrichment
MF	GO:0003714	transcription corepressor activity	IEP	Enrichment
MF	GO:0005342	organic acid transmembrane transporter activity	IEP	Enrichment
BP	GO:0006027	glycosaminoglycan catabolic process	IEP	Enrichment
BP	GO:0006171	cAMP biosynthetic process	IEP	Enrichment
BP	GO:0006284	base-excision repair	IEP	Enrichment
BP	GO:0009187	cyclic nucleotide metabolic process	IEP	Enrichment
BP	GO:0009190	cyclic nucleotide biosynthetic process	IEP	Enrichment
BP	GO:0009253	peptidoglycan catabolic process	IEP	Enrichment
MF	GO:0015171	amino acid transmembrane transporter activity	IEP	Enrichment
MF	GO:0015179	L-amino acid transmembrane transporter activity	IEP	Enrichment
MF	GO:0015562	efflux transmembrane transporter activity	IEP	Enrichment
MF	GO:0016989	sigma factor antagonist activity	IEP	Enrichment
MF	GO:0030145	manganese ion binding	IEP	Enrichment
BP	GO:0030203	glycosaminoglycan metabolic process	IEP	Enrichment
MF	GO:0034639	L-amino acid efflux transmembrane transporter activity	IEP	Enrichment
BP	GO:0046058	cAMP metabolic process	IEP	Enrichment
MF	GO:0046943	carboxylic acid transmembrane transporter activity	IEP	Enrichment
MF	GO:0047429	nucleoside-triphosphate diphosphatase activity	IEP	Enrichment
MF	GO:0047605	acetolactate decarboxylase activity	IEP	Enrichment
BP	GO:0052652	cyclic purine nucleotide metabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000551	MerR-type_HTH_dom	2	39
IPR015358	Tscrpt_reg_MerR_DNA-bd	45	107

External Links

No external refs found!